Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 AC009542.2-202ENST00000619004 1067 ntBASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 AC005089.1-201ENST00000619486 2241 ntBASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CUEDC1Q9NWM3 AC005912.2-201ENST00000619492 2400 ntBASIC14.27□□□□□ -0.12
CUEDC1Q9NWM3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CUEDC1Q9NWM3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CUEDC1Q9NWM3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.27□□□□□ -0.12
CUEDC1Q9NWM3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CUEDC1Q9NWM3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CUEDC1Q9NWM3 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CUEDC1Q9NWM3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CUEDC1Q9NWM3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CUEDC1Q9NWM3 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CUEDC1Q9NWM3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.27□□□□□ -0.12
CUEDC1Q9NWM3 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CUEDC1Q9NWM3 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CUEDC1Q9NWM3 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CUEDC1Q9NWM3 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CUEDC1Q9NWM3 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CUEDC1Q9NWM3 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.27□□□□□ -0.13
CUEDC1Q9NWM3 AC022447.6-201ENST00000515522 438 ntBASIC14.27□□□□□ -0.13
CUEDC1Q9NWM3 AP001258.2-201ENST00000529891 490 ntBASIC14.27□□□□□ -0.13
CUEDC1Q9NWM3 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.27□□□□□ -0.13
CUEDC1Q9NWM3 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.27□□□□□ -0.13
CUEDC1Q9NWM3 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CUEDC1Q9NWM3 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.27□□□□□ -0.13
CUEDC1Q9NWM3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CUEDC1Q9NWM3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CUEDC1Q9NWM3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.27□□□□□ -0.13
CUEDC1Q9NWM3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CUEDC1Q9NWM3 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CUEDC1Q9NWM3 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.27□□□□□ -0.13
CUEDC1Q9NWM3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CUEDC1Q9NWM3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.27□□□□□ -0.13
CUEDC1Q9NWM3 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CUEDC1Q9NWM3 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CUEDC1Q9NWM3 AL023775.1-201ENST00000454907 1746 ntBASIC14.27□□□□□ -0.13
CUEDC1Q9NWM3 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CUEDC1Q9NWM3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 DUX4L45-201ENST00000566406 1057 ntBASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 RN7SL560P-201ENST00000577943 264 ntBASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 AL022328.3-201ENST00000607943 679 ntBASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 BX088702.1-201ENST00000610784 235 ntBASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 AC091271.1-201ENST00000611877 1162 ntBASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 AP001002.3-201ENST00000623482 206 ntBASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CUEDC1Q9NWM3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms