Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 AC092299.1-201ENST00000632679 757 ntBASIC17.12■□□□□ 0.33
EFCC1Q9HA90 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 AC078875.1-201ENST00000431907 724 ntBASIC17.11■□□□□ 0.33
EFCC1Q9HA90 CHCHD2P9-201ENST00000461726 456 ntBASIC17.11■□□□□ 0.33
EFCC1Q9HA90 RPL18AP3-201ENST00000462885 528 ntBASIC17.11■□□□□ 0.33
EFCC1Q9HA90 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 RN7SL596P-201ENST00000582123 288 ntBASIC17.11■□□□□ 0.33
EFCC1Q9HA90 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 AC087392.5-201ENST00000612517 489 ntBASIC17.11■□□□□ 0.33
EFCC1Q9HA90 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
EFCC1Q9HA90 AC007191.1-201ENST00000623179 2995 ntBASIC17.1■□□□□ 0.33
EFCC1Q9HA90 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 ALG1L6P-201ENST00000515248 758 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms