Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 AC106760.1-201ENST00000508690 800 ntBASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 AC131206.1-201ENST00000538078 1211 ntBASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 AC025279.2-201ENST00000569730 653 ntBASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 AC233724.13-201ENST00000598383 410 ntBASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 KRT43P-201ENST00000434019 910 ntBASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 AC016694.1-201ENST00000434179 700 ntBASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 BCRP2-202ENST00000447763 634 ntBASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 BCRP6-201ENST00000510112 632 ntBASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 BCRP7-201ENST00000511549 544 ntBASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 RNA5SP486-201ENST00000515961 83 ntBASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 BTNL10-201ENST00000595971 695 ntBASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 AC138696.2-201ENST00000607376 223 ntBASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 RPSAP52-203ENST00000622976 1023 ntBASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIM54Q9BYV2 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms