Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 NORAD-201ENST00000565493 5339 ntBASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 AL512384.1-201ENST00000406683 331 ntBASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 AC015936.2-201ENST00000593177 259 ntBASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 BAP1-211ENST00000615113 489 ntBASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO3Q9BXY4 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 E2F3P2-201ENST00000447755 1422 ntBASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 AC068760.1-201ENST00000493579 1953 ntBASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 AL136309.1-201ENST00000403917 691 ntBASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 MIR1202-201ENST00000408529 83 ntBASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 COX5BP8-201ENST00000416911 349 ntBASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 AL645933.1-201ENST00000440087 609 ntBASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 KLF2P1-201ENST00000447438 1042 ntBASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 CROCCP4-201ENST00000457096 498 ntBASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 AC005586.2-201ENST00000563946 837 ntBASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 AC138951.2-201ENST00000623455 1161 ntBASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 CICP8-201ENST00000455800 2813 ntBASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
RSPO3Q9BXY4 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms