Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 MRPL23-203ENST00000397294 551 ntTSL 4 BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 RPL5P21-201ENST00000404620 815 ntBASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 NOS2P3-201ENST00000411468 867 ntBASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 NOS2P2-201ENST00000426269 867 ntBASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 AL512422.2-201ENST00000426453 551 ntTSL 2 BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 LINC00618-201ENST00000435624 700 ntTSL 5 BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 RN7SL638P-201ENST00000494527 290 ntBASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 AC007992.1-201ENST00000513953 953 ntBASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 AL352977.2-201ENST00000557101 547 ntTSL 4 BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 AC138907.9-201ENST00000623747 986 ntBASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 FURIN-208ENST00000640725 224 ntTSL 5 BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 AC005915.1-201ENST00000624912 2018 ntBASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 AL359258.3-201ENST00000622910 2331 ntBASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 RNF216P1-203ENST00000404404 2427 ntBASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 AL356583.1-201ENST00000398739 1371 ntBASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 RPL10-203ENST00000406022 748 ntTSL 3 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 ACP1-207ENST00000439645 605 ntTSL 2 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 AC131097.4-201ENST00000442867 571 ntTSL 4 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 FPGT-205ENST00000482102 561 ntTSL 4 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 RN7SL2-201ENST00000490232 300 ntBASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 GIMD1-201ENST00000507153 654 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 AC022447.2-201ENST00000509750 543 ntTSL 3 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 AC140658.4-201ENST00000561990 352 ntBASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 MIR5091-201ENST00000578707 93 ntBASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 RN7SL4P-201ENST00000584058 295 ntBASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 AC009812.1-201ENST00000605948 1059 ntBASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 AC123595.2-201ENST00000607854 549 ntTSL 4 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 PUDPP2-202ENST00000628080 737 ntTSL 5 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.36□□□□□ -0.11
COL25A1Q9BXS0 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC14.35□□□□□ -0.11
COL25A1Q9BXS0 AL139424.2-202ENST00000641335 1369 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms