Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 AJ011931.1-201ENST00000618749 2492 ntBASIC17.05■□□□□ 0.32
SLF1Q9BQI6 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 AC144522.1-201ENST00000625111 1658 ntBASIC17.05■□□□□ 0.32
SLF1Q9BQI6 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 MIR3907-201ENST00000579424 151 ntBASIC17.05■□□□□ 0.32
SLF1Q9BQI6 RN7SL190P-201ENST00000582519 257 ntBASIC17.05■□□□□ 0.32
SLF1Q9BQI6 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLF1Q9BQI6 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 MRPL37P1-201ENST00000592451 1337 ntBASIC17.04■□□□□ 0.32
SLF1Q9BQI6 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 AC103988.2-201ENST00000561804 725 ntBASIC17.04■□□□□ 0.32
SLF1Q9BQI6 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 AC020922.3-201ENST00000595064 547 ntBASIC17.04■□□□□ 0.32
SLF1Q9BQI6 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 AL353770.1-201ENST00000614915 403 ntBASIC17.04■□□□□ 0.32
SLF1Q9BQI6 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLF1Q9BQI6 AL136172.1-201ENST00000598590 1394 ntBASIC17.03■□□□□ 0.32
SLF1Q9BQI6 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.03■□□□□ 0.32
SLF1Q9BQI6 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SLF1Q9BQI6 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.03■□□□□ 0.32
SLF1Q9BQI6 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLF1Q9BQI6 AC091046.1-201ENST00000331871 207 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms