Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.5□□□□□ -0.41
CLCC1Q96S66 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.5□□□□□ -0.41
CLCC1Q96S66 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.5□□□□□ -0.41
CLCC1Q96S66 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLCC1Q96S66 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC12.5□□□□□ -0.41
CLCC1Q96S66 AC087499.5-201ENST00000452760 1342 ntBASIC12.5□□□□□ -0.41
CLCC1Q96S66 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLCC1Q96S66 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLCC1Q96S66 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.5□□□□□ -0.41
CLCC1Q96S66 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.5□□□□□ -0.41
CLCC1Q96S66 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.5□□□□□ -0.41
CLCC1Q96S66 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLCC1Q96S66 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLCC1Q96S66 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.5□□□□□ -0.41
CLCC1Q96S66 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLCC1Q96S66 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLCC1Q96S66 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLCC1Q96S66 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLCC1Q96S66 AC015909.5-201ENST00000624336 2266 ntBASIC12.5□□□□□ -0.41
CLCC1Q96S66 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLCC1Q96S66 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLCC1Q96S66 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLCC1Q96S66 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLCC1Q96S66 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLCC1Q96S66 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLCC1Q96S66 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.5□□□□□ -0.41
CLCC1Q96S66 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLCC1Q96S66 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.5□□□□□ -0.41
CLCC1Q96S66 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CLCC1Q96S66 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLCC1Q96S66 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CLCC1Q96S66 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.49□□□□□ -0.41
CLCC1Q96S66 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.49□□□□□ -0.41
CLCC1Q96S66 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.49□□□□□ -0.41
CLCC1Q96S66 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.49□□□□□ -0.41
CLCC1Q96S66 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.49□□□□□ -0.41
CLCC1Q96S66 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CLCC1Q96S66 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.49□□□□□ -0.41
CLCC1Q96S66 Z97205.2-201ENST00000564697 1639 ntBASIC12.49□□□□□ -0.41
CLCC1Q96S66 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.49□□□□□ -0.41
CLCC1Q96S66 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
CLCC1Q96S66 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.49□□□□□ -0.41
CLCC1Q96S66 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CLCC1Q96S66 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CLCC1Q96S66 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.49□□□□□ -0.41
CLCC1Q96S66 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.49□□□□□ -0.41
CLCC1Q96S66 PMS2P2-201ENST00000425039 1128 ntBASIC12.49□□□□□ -0.41
CLCC1Q96S66 AC055876.3-201ENST00000431496 288 ntBASIC12.49□□□□□ -0.41
CLCC1Q96S66 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.49□□□□□ -0.41
CLCC1Q96S66 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.49□□□□□ -0.41
CLCC1Q96S66 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.49□□□□□ -0.41
CLCC1Q96S66 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.49□□□□□ -0.41
CLCC1Q96S66 AC074044.1-201ENST00000609673 707 ntBASIC12.49□□□□□ -0.41
CLCC1Q96S66 AC138649.4-201ENST00000612222 287 ntBASIC12.49□□□□□ -0.41
CLCC1Q96S66 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
CLCC1Q96S66 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC12.49□□□□□ -0.41
CLCC1Q96S66 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.49□□□□□ -0.41
CLCC1Q96S66 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CLCC1Q96S66 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CLCC1Q96S66 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLCC1Q96S66 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLCC1Q96S66 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLCC1Q96S66 AL591122.2-201ENST00000624125 1853 ntBASIC12.48□□□□□ -0.41
CLCC1Q96S66 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLCC1Q96S66 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLCC1Q96S66 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLCC1Q96S66 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CLCC1Q96S66 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLCC1Q96S66 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLCC1Q96S66 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLCC1Q96S66 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLCC1Q96S66 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms