Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC11.97□□□□□ -0.49
RAB40CQ96S21 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
RAB40CQ96S21 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RAB40CQ96S21 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RAB40CQ96S21 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
RAB40CQ96S21 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RAB40CQ96S21 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RAB40CQ96S21 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC11.97□□□□□ -0.49
RAB40CQ96S21 RPL37AP1-201ENST00000412502 279 ntBASIC11.97□□□□□ -0.49
RAB40CQ96S21 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC11.97□□□□□ -0.49
RAB40CQ96S21 AC007969.1-201ENST00000433675 447 ntBASIC11.97□□□□□ -0.49
RAB40CQ96S21 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RAB40CQ96S21 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC11.97□□□□□ -0.49
RAB40CQ96S21 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC11.97□□□□□ -0.49
RAB40CQ96S21 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC11.97□□□□□ -0.49
RAB40CQ96S21 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
RAB40CQ96S21 DAD1-205ENST00000543337 501 ntTSL 3 BASIC11.97□□□□□ -0.49
RAB40CQ96S21 TIMM17BP1-201ENST00000545713 516 ntBASIC11.97□□□□□ -0.49
RAB40CQ96S21 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
RAB40CQ96S21 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC11.97□□□□□ -0.49
RAB40CQ96S21 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC11.97□□□□□ -0.49
RAB40CQ96S21 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RAB40CQ96S21 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC11.97□□□□□ -0.49
RAB40CQ96S21 AL109936.8-201ENST00000641772 604 ntBASIC11.97□□□□□ -0.49
RAB40CQ96S21 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC11.97□□□□□ -0.49
RAB40CQ96S21 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RAB40CQ96S21 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC11.97□□□□□ -0.49
RAB40CQ96S21 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC11.97□□□□□ -0.49
RAB40CQ96S21 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RAB40CQ96S21 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC11.97□□□□□ -0.49
RAB40CQ96S21 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RAB40CQ96S21 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RAB40CQ96S21 SALL4P5-201ENST00000419001 1760 ntBASIC11.97□□□□□ -0.49
RAB40CQ96S21 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC11.97□□□□□ -0.49
RAB40CQ96S21 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RAB40CQ96S21 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RAB40CQ96S21 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RAB40CQ96S21 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RAB40CQ96S21 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
RAB40CQ96S21 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
RAB40CQ96S21 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC11.96□□□□□ -0.49
RAB40CQ96S21 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RAB40CQ96S21 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RAB40CQ96S21 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RAB40CQ96S21 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RAB40CQ96S21 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC11.96□□□□□ -0.49
RAB40CQ96S21 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
RAB40CQ96S21 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
RAB40CQ96S21 AC011498.7-201ENST00000624986 2027 ntBASIC11.96□□□□□ -0.49
RAB40CQ96S21 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC11.96□□□□□ -0.49
RAB40CQ96S21 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RAB40CQ96S21 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
RAB40CQ96S21 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RAB40CQ96S21 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
RAB40CQ96S21 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RAB40CQ96S21 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RAB40CQ96S21 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
RAB40CQ96S21 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
RAB40CQ96S21 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC11.96□□□□□ -0.49
RAB40CQ96S21 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RAB40CQ96S21 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RAB40CQ96S21 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RAB40CQ96S21 MRPL37P1-201ENST00000592451 1337 ntBASIC11.96□□□□□ -0.49
RAB40CQ96S21 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC11.96□□□□□ -0.49
RAB40CQ96S21 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC11.96□□□□□ -0.49
RAB40CQ96S21 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
RAB40CQ96S21 AL122018.1-201ENST00000446607 2310 ntBASIC11.96□□□□□ -0.49
RAB40CQ96S21 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RAB40CQ96S21 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
RAB40CQ96S21 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC11.96□□□□□ -0.49
RAB40CQ96S21 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RAB40CQ96S21 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
RAB40CQ96S21 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
RAB40CQ96S21 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC11.96□□□□□ -0.49
RAB40CQ96S21 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
RAB40CQ96S21 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC11.96□□□□□ -0.49
RAB40CQ96S21 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC11.96□□□□□ -0.49
RAB40CQ96S21 AC051619.7-201ENST00000568314 623 ntBASIC11.96□□□□□ -0.49
RAB40CQ96S21 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RAB40CQ96S21 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC11.96□□□□□ -0.49
RAB40CQ96S21 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RAB40CQ96S21 AP001059.3-201ENST00000619053 235 ntBASIC11.96□□□□□ -0.49
RAB40CQ96S21 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
RAB40CQ96S21 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC11.96□□□□□ -0.49
RAB40CQ96S21 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
RAB40CQ96S21 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RAB40CQ96S21 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RAB40CQ96S21 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RAB40CQ96S21 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RAB40CQ96S21 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC11.96□□□□□ -0.49
RAB40CQ96S21 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
RAB40CQ96S21 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC11.96□□□□□ -0.5
RAB40CQ96S21 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RAB40CQ96S21 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
RAB40CQ96S21 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RAB40CQ96S21 AL138799.1-201ENST00000448213 1675 ntBASIC11.96□□□□□ -0.5
RAB40CQ96S21 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RAB40CQ96S21 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC11.96□□□□□ -0.5
RAB40CQ96S21 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RAB40CQ96S21 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms