Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
SNX18Q96RF0 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNX18Q96RF0 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SNX18Q96RF0 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SNX18Q96RF0 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
SNX18Q96RF0 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SNX18Q96RF0 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
SNX18Q96RF0 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
SNX18Q96RF0 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
SNX18Q96RF0 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.48□□□□□ -0.25
SNX18Q96RF0 INTS4P2-202ENST00000614726 2019 ntBASIC13.48□□□□□ -0.25
SNX18Q96RF0 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 AC004945.1-201ENST00000416738 983 ntBASIC13.48□□□□□ -0.25
SNX18Q96RF0 AL442647.2-201ENST00000429864 857 ntBASIC13.48□□□□□ -0.25
SNX18Q96RF0 DFFBP1-201ENST00000433250 979 ntBASIC13.48□□□□□ -0.25
SNX18Q96RF0 AC055876.2-201ENST00000531834 546 ntBASIC13.48□□□□□ -0.25
SNX18Q96RF0 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.48□□□□□ -0.25
SNX18Q96RF0 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.48□□□□□ -0.25
SNX18Q96RF0 AC120045.2-201ENST00000567334 178 ntBASIC13.48□□□□□ -0.25
SNX18Q96RF0 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.48□□□□□ -0.25
SNX18Q96RF0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.48□□□□□ -0.25
SNX18Q96RF0 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.48□□□□□ -0.25
SNX18Q96RF0 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.48□□□□□ -0.25
SNX18Q96RF0 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SNX18Q96RF0 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SNX18Q96RF0 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SNX18Q96RF0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
SNX18Q96RF0 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.48□□□□□ -0.25
SNX18Q96RF0 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.48□□□□□ -0.25
SNX18Q96RF0 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.48□□□□□ -0.25
SNX18Q96RF0 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SNX18Q96RF0 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNX18Q96RF0 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SNX18Q96RF0 CU639417.3-201ENST00000624240 1404 ntBASIC13.47□□□□□ -0.25
SNX18Q96RF0 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
SNX18Q96RF0 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SNX18Q96RF0 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
SNX18Q96RF0 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SNX18Q96RF0 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
SNX18Q96RF0 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.47□□□□□ -0.25
SNX18Q96RF0 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SNX18Q96RF0 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.47□□□□□ -0.25
SNX18Q96RF0 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.47□□□□□ -0.25
SNX18Q96RF0 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SNX18Q96RF0 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.47□□□□□ -0.25
SNX18Q96RF0 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 AC087499.6-201ENST00000411576 835 ntBASIC13.47□□□□□ -0.25
SNX18Q96RF0 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.47□□□□□ -0.25
SNX18Q96RF0 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.47□□□□□ -0.25
SNX18Q96RF0 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.47□□□□□ -0.25
SNX18Q96RF0 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms