Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRCH3Q96II8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRCH3Q96II8 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRCH3Q96II8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRCH3Q96II8 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LRCH3Q96II8 AC018629.1-201ENST00000623381 1736 ntBASIC15.8■□□□□ 0.12
LRCH3Q96II8 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRCH3Q96II8 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRCH3Q96II8 PPT1-215ENST00000641471 2368 ntBASIC15.79■□□□□ 0.12
LRCH3Q96II8 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRCH3Q96II8 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRCH3Q96II8 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 AP003680.1-201ENST00000598970 3660 ntBASIC15.79■□□□□ 0.12
LRCH3Q96II8 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRCH3Q96II8 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 MST1L-201ENST00000442552 2185 ntBASIC15.79■□□□□ 0.12
LRCH3Q96II8 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRCH3Q96II8 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRCH3Q96II8 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRCH3Q96II8 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRCH3Q96II8 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRCH3Q96II8 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRCH3Q96II8 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRCH3Q96II8 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRCH3Q96II8 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 DKKL1P1-201ENST00000400550 698 ntBASIC15.79■□□□□ 0.12
LRCH3Q96II8 FAM197Y6-201ENST00000420524 766 ntBASIC15.79■□□□□ 0.12
LRCH3Q96II8 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRCH3Q96II8 KRT8P30-201ENST00000432100 650 ntBASIC15.79■□□□□ 0.12
LRCH3Q96II8 MAGEA7P-201ENST00000436482 942 ntBASIC15.79■□□□□ 0.12
LRCH3Q96II8 AL451000.1-201ENST00000451300 1186 ntBASIC15.79■□□□□ 0.12
LRCH3Q96II8 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 ALG1L3P-201ENST00000503331 765 ntBASIC15.79■□□□□ 0.12
LRCH3Q96II8 GPX3-202ENST00000517973 612 ntTSL 3 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 MIR2392-201ENST00000584881 84 ntBASIC15.79■□□□□ 0.12
LRCH3Q96II8 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 PHF23-213ENST00000613632 850 ntTSL 5 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 AC020922.4-201ENST00000621389 339 ntBASIC15.79■□□□□ 0.12
LRCH3Q96II8 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRCH3Q96II8 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRCH3Q96II8 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRCH3Q96II8 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRCH3Q96II8 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRCH3Q96II8 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRCH3Q96II8 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRCH3Q96II8 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRCH3Q96II8 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LRCH3Q96II8 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LRCH3Q96II8 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH3Q96II8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LRCH3Q96II8 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH3Q96II8 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LRCH3Q96II8 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LRCH3Q96II8 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC15.78■□□□□ 0.12
LRCH3Q96II8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH3Q96II8 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH3Q96II8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
LRCH3Q96II8 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.78■□□□□ 0.12
LRCH3Q96II8 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH3Q96II8 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LRCH3Q96II8 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
LRCH3Q96II8 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH3Q96II8 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH3Q96II8 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH3Q96II8 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH3Q96II8 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH3Q96II8 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.78■□□□□ 0.12
LRCH3Q96II8 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.78■□□□□ 0.12
LRCH3Q96II8 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH3Q96II8 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH3Q96II8 RN7SKP230-201ENST00000365642 335 ntBASIC15.78■□□□□ 0.12
LRCH3Q96II8 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC15.78■□□□□ 0.12
LRCH3Q96II8 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH3Q96II8 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH3Q96II8 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH3Q96II8 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
LRCH3Q96II8 XBP1P1-201ENST00000436573 652 ntBASIC15.78■□□□□ 0.12
LRCH3Q96II8 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms