Protein–RNA interactions for Protein: Q96EX2

RNFT2, RING finger and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT2Q96EX2 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 AC069262.1-201ENST00000539058 672 ntBASIC13.39□□□□□ -0.27
RNFT2Q96EX2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 AL138799.1-201ENST00000448213 1675 ntBASIC13.39□□□□□ -0.27
RNFT2Q96EX2 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 FAM90A12P-201ENST00000519497 2375 ntBASIC13.39□□□□□ -0.27
RNFT2Q96EX2 FAM90A24P-201ENST00000520792 2369 ntBASIC13.39□□□□□ -0.27
RNFT2Q96EX2 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
RNFT2Q96EX2 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 AC092364.2-202ENST00000597012 1073 ntBASIC13.38□□□□□ -0.27
RNFT2Q96EX2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.38□□□□□ -0.27
RNFT2Q96EX2 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 AC215219.1-201ENST00000400706 1817 ntBASIC13.38□□□□□ -0.27
RNFT2Q96EX2 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 AC111170.3-201ENST00000624282 2464 ntBASIC13.38□□□□□ -0.27
RNFT2Q96EX2 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 AC027612.1-201ENST00000445234 2395 ntBASIC13.38□□□□□ -0.27
RNFT2Q96EX2 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 DRD5P1-201ENST00000456605 1438 ntBASIC13.38□□□□□ -0.27
RNFT2Q96EX2 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 AC073548.1-201ENST00000624088 1882 ntBASIC13.38□□□□□ -0.27
RNFT2Q96EX2 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RNFT2Q96EX2 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms