Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN23Q96B33 PKD1P5-201ENST00000532415 10291 ntBASIC14.39□□□□□ -0.11
CLDN23Q96B33 PTGER4P2-201ENST00000328411 252 ntBASIC14.39□□□□□ -0.11
CLDN23Q96B33 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC14.39□□□□□ -0.11
CLDN23Q96B33 SERBP1P2-201ENST00000436888 1164 ntBASIC14.39□□□□□ -0.11
CLDN23Q96B33 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN23Q96B33 PTGER4P3-201ENST00000458150 252 ntBASIC14.39□□□□□ -0.11
CLDN23Q96B33 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC14.39□□□□□ -0.11
CLDN23Q96B33 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.39□□□□□ -0.11
CLDN23Q96B33 AC005586.2-201ENST00000563946 837 ntBASIC14.39□□□□□ -0.11
CLDN23Q96B33 AC091769.1-201ENST00000619576 568 ntBASIC14.39□□□□□ -0.11
CLDN23Q96B33 AP000769.1-203ENST00000637245 208 ntBASIC14.39□□□□□ -0.11
CLDN23Q96B33 AC019109.1-201ENST00000401725 1874 ntBASIC14.39□□□□□ -0.11
CLDN23Q96B33 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN23Q96B33 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDN23Q96B33 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN23Q96B33 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.39□□□□□ -0.11
CLDN23Q96B33 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CLDN23Q96B33 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN23Q96B33 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN23Q96B33 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDN23Q96B33 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN23Q96B33 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.39□□□□□ -0.11
CLDN23Q96B33 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CLDN23Q96B33 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
CLDN23Q96B33 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
CLDN23Q96B33 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CLDN23Q96B33 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN23Q96B33 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN23Q96B33 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN23Q96B33 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CLDN23Q96B33 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN23Q96B33 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN23Q96B33 ODCP-201ENST00000459650 1639 ntBASIC14.38□□□□□ -0.11
CLDN23Q96B33 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CLDN23Q96B33 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDN23Q96B33 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.38□□□□□ -0.11
CLDN23Q96B33 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDN23Q96B33 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN23Q96B33 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN23Q96B33 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN23Q96B33 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN23Q96B33 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN23Q96B33 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN23Q96B33 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN23Q96B33 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN23Q96B33 OR7E115P-201ENST00000382617 1024 ntBASIC14.38□□□□□ -0.11
CLDN23Q96B33 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC14.38□□□□□ -0.11
CLDN23Q96B33 AL929302.1-201ENST00000426556 871 ntBASIC14.38□□□□□ -0.11
CLDN23Q96B33 NME6-208ENST00000435684 599 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDN23Q96B33 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDN23Q96B33 ASS1P2-201ENST00000439895 1223 ntBASIC14.38□□□□□ -0.11
CLDN23Q96B33 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC14.38□□□□□ -0.11
CLDN23Q96B33 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDN23Q96B33 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CLDN23Q96B33 AC005740.1-201ENST00000515639 522 ntBASIC14.38□□□□□ -0.11
CLDN23Q96B33 VENTXP3-201ENST00000546480 773 ntBASIC14.38□□□□□ -0.11
CLDN23Q96B33 KLF17P1-201ENST00000547105 1126 ntBASIC14.38□□□□□ -0.11
CLDN23Q96B33 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CLDN23Q96B33 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC14.38□□□□□ -0.11
CLDN23Q96B33 NT5C-204ENST00000578337 582 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDN23Q96B33 MIR5001-201ENST00000580185 100 ntBASIC14.38□□□□□ -0.11
CLDN23Q96B33 NAV1-210ENST00000593583 726 ntBASIC14.38□□□□□ -0.11
CLDN23Q96B33 AL160191.2-201ENST00000603975 601 ntBASIC14.38□□□□□ -0.11
CLDN23Q96B33 AL009176.1-201ENST00000607876 650 ntBASIC14.38□□□□□ -0.11
CLDN23Q96B33 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN23Q96B33 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CLDN23Q96B33 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN23Q96B33 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN23Q96B33 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN23Q96B33 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDN23Q96B33 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN23Q96B33 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CLDN23Q96B33 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN23Q96B33 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN23Q96B33 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDN23Q96B33 ENPP7P8-202ENST00000527856 1345 ntBASIC14.38□□□□□ -0.11
CLDN23Q96B33 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
CLDN23Q96B33 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
CLDN23Q96B33 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.37□□□□□ -0.11
CLDN23Q96B33 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.37□□□□□ -0.11
CLDN23Q96B33 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.37□□□□□ -0.11
CLDN23Q96B33 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.37□□□□□ -0.11
CLDN23Q96B33 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.37□□□□□ -0.11
CLDN23Q96B33 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CLDN23Q96B33 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.37□□□□□ -0.11
CLDN23Q96B33 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CLDN23Q96B33 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CLDN23Q96B33 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CLDN23Q96B33 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN23Q96B33 UROS-201ENST00000368774 744 ntTSL 2 BASIC14.37□□□□□ -0.11
CLDN23Q96B33 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms