Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM4Q8WVI0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 FAAHP1-202ENST00000446499 1238 ntBASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 AL589739.1-201ENST00000607720 493 ntBASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 AC003102.2-201ENST00000589195 1469 ntBASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 CETN4P-206ENST00000642099 2168 ntBASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 Z98257.2-202ENST00000641138 1548 ntBASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SMIM4Q8WVI0 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 AC131206.1-201ENST00000538078 1211 ntBASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 AC105339.1-204ENST00000636249 355 ntBASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SMIM4Q8WVI0 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms