Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 AC005840.4-201ENST00000541242 2494 ntBASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 AL355994.2-201ENST00000447882 704 ntBASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 AP006547.1-201ENST00000563435 692 ntBASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 FAM21FP-201ENST00000426241 1131 ntBASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 HIST2H2BB-201ENST00000449108 381 ntBASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 AL583810.1-201ENST00000553344 1045 ntBASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 AL136301.1-201ENST00000615830 422 ntBASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 AC009093.10-201ENST00000641956 1442 ntBASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 SHC1P1-201ENST00000425230 1745 ntBASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDH19Q8TAB3 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms