Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NEDD1Q8NHV4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEDD1Q8NHV4 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEDD1Q8NHV4 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NEDD1Q8NHV4 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEDD1Q8NHV4 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.95■□□□□ 0.3
NEDD1Q8NHV4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.95■□□□□ 0.3
NEDD1Q8NHV4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEDD1Q8NHV4 AC106881.1-201ENST00000605849 3329 ntBASIC16.95■□□□□ 0.3
NEDD1Q8NHV4 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 AC026320.2-201ENST00000434379 478 ntBASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 CEP164P1-201ENST00000455142 418 ntBASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 RN7SL530P-201ENST00000485097 298 ntBASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 AC093752.3-201ENST00000567343 901 ntBASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 LINC01783-202ENST00000614408 828 ntBASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 BX284668.2-205ENST00000619677 828 ntBASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 AC015967.2-201ENST00000624092 234 ntBASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 AC006435.4-201ENST00000625037 234 ntBASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 AL356737.1-201ENST00000634391 234 ntBASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
NEDD1Q8NHV4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 INTS4P1-203ENST00000641008 3683 ntBASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 OR2K2-202ENST00000374428 1038 ntBASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 BANF1P3-201ENST00000412556 261 ntBASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 AC234782.1-201ENST00000451950 919 ntBASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 AC084346.2-201ENST00000607097 949 ntBASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD1Q8NHV4 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms