Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
BEST2Q8NFU1 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.76■□□□□ 0.11
BEST2Q8NFU1 AC125604.1-201ENST00000496255 707 ntBASIC15.76■□□□□ 0.11
BEST2Q8NFU1 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
BEST2Q8NFU1 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BEST2Q8NFU1 AC009779.1-201ENST00000551138 283 ntBASIC15.76■□□□□ 0.11
BEST2Q8NFU1 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
BEST2Q8NFU1 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.76■□□□□ 0.11
BEST2Q8NFU1 AC100757.4-201ENST00000626934 759 ntBASIC15.76■□□□□ 0.11
BEST2Q8NFU1 AL805961.1-203ENST00000641078 1258 ntBASIC15.76■□□□□ 0.11
BEST2Q8NFU1 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
BEST2Q8NFU1 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.76■□□□□ 0.11
BEST2Q8NFU1 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BEST2Q8NFU1 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
BEST2Q8NFU1 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
BEST2Q8NFU1 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
BEST2Q8NFU1 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BEST2Q8NFU1 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BEST2Q8NFU1 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.76■□□□□ 0.11
BEST2Q8NFU1 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BEST2Q8NFU1 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.76■□□□□ 0.11
BEST2Q8NFU1 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.76■□□□□ 0.11
BEST2Q8NFU1 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
BEST2Q8NFU1 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.76■□□□□ 0.11
BEST2Q8NFU1 INTS4P1-203ENST00000641008 3683 ntBASIC15.75■□□□□ 0.11
BEST2Q8NFU1 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 CYP4F23P-201ENST00000593402 1579 ntBASIC15.75■□□□□ 0.11
BEST2Q8NFU1 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.75■□□□□ 0.11
BEST2Q8NFU1 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 AC091544.8-201ENST00000619490 361 ntBASIC15.75■□□□□ 0.11
BEST2Q8NFU1 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 AC068587.10-201ENST00000641210 219 ntBASIC15.75■□□□□ 0.11
BEST2Q8NFU1 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BEST2Q8NFU1 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 MIR769-201ENST00000390225 118 ntBASIC15.74■□□□□ 0.11
BEST2Q8NFU1 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.74■□□□□ 0.11
BEST2Q8NFU1 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 AC078875.1-201ENST00000431907 724 ntBASIC15.74■□□□□ 0.11
BEST2Q8NFU1 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 TPT1P11-201ENST00000458482 498 ntBASIC15.74■□□□□ 0.11
BEST2Q8NFU1 RCC2P8-201ENST00000502779 1035 ntBASIC15.74■□□□□ 0.11
BEST2Q8NFU1 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BEST2Q8NFU1 AC106872.11-201ENST00000605838 421 ntBASIC15.74■□□□□ 0.11
BEST2Q8NFU1 AC084346.2-201ENST00000607097 949 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms