Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.07□□□□□ -0.16
SRFBP1Q8NEF9 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRFBP1Q8NEF9 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SRFBP1Q8NEF9 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRFBP1Q8NEF9 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRFBP1Q8NEF9 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.07□□□□□ -0.16
SRFBP1Q8NEF9 AC009093.2-202ENST00000620513 2079 ntBASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 KRT8P4-201ENST00000509735 1454 ntBASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 MIR1909-201ENST00000411312 80 ntBASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 AC133552.6-201ENST00000613406 534 ntBASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRFBP1Q8NEF9 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 AC005912.2-201ENST00000619492 2400 ntBASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 AL590440.2-201ENST00000641973 1595 ntBASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 KHSRPP1-201ENST00000427983 1768 ntBASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 AC026954.1-201ENST00000429771 1293 ntBASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 YBX1P6-201ENST00000442962 1002 ntBASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 CHMP1AP1-201ENST00000445563 662 ntBASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 MIR6805-201ENST00000615055 62 ntBASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 AL136301.1-201ENST00000615830 422 ntBASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 AC027601.3-201ENST00000622907 509 ntBASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SRFBP1Q8NEF9 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms