Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 AC010141.1-201ENST00000411585 623 ntBASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 CICP12-201ENST00000455801 843 ntBASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 AC103988.2-201ENST00000561804 725 ntBASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 AL590440.2-201ENST00000641973 1595 ntBASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.79□□□□□ -0.04
LYSMD3Q7Z3D4 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 AC139712.1-201ENST00000378256 1875 ntBASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 E2F3P2-201ENST00000447755 1422 ntBASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 MTX1P1-201ENST00000440904 838 ntBASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 Z93015.1-201ENST00000451718 390 ntBASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 TPT1P11-201ENST00000458482 498 ntBASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 FAM86HP-204ENST00000513466 959 ntBASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 AC244157.2-201ENST00000616239 1006 ntBASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 OR2I1P-210ENST00000642037 4691 ntBASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD3Q7Z3D4 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.77□□□□□ -0.04
LYSMD3Q7Z3D4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD3Q7Z3D4 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD3Q7Z3D4 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD3Q7Z3D4 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD3Q7Z3D4 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD3Q7Z3D4 AC015818.8-201ENST00000587907 1519 ntBASIC14.77□□□□□ -0.04
LYSMD3Q7Z3D4 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD3Q7Z3D4 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.77□□□□□ -0.04
LYSMD3Q7Z3D4 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD3Q7Z3D4 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD3Q7Z3D4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD3Q7Z3D4 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
LYSMD3Q7Z3D4 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.77□□□□□ -0.04
LYSMD3Q7Z3D4 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD3Q7Z3D4 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD3Q7Z3D4 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms