Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
USP50Q70EL3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP50Q70EL3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
USP50Q70EL3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP50Q70EL3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP50Q70EL3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
USP50Q70EL3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP50Q70EL3 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP50Q70EL3 SIRPB3P-201ENST00000340424 1216 ntBASIC16.89■□□□□ 0.29
USP50Q70EL3 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP50Q70EL3 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
USP50Q70EL3 ABCD1P4-201ENST00000399687 604 ntBASIC16.89■□□□□ 0.29
USP50Q70EL3 AL157823.1-201ENST00000403727 628 ntBASIC16.89■□□□□ 0.29
USP50Q70EL3 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
USP50Q70EL3 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
USP50Q70EL3 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC16.89■□□□□ 0.29
USP50Q70EL3 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC16.89■□□□□ 0.29
USP50Q70EL3 SLC25A15P3-201ENST00000505530 290 ntBASIC16.89■□□□□ 0.29
USP50Q70EL3 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC16.89■□□□□ 0.29
USP50Q70EL3 AC078814.4-201ENST00000546650 327 ntBASIC16.89■□□□□ 0.29
USP50Q70EL3 PMEL-214ENST00000550447 901 ntTSL 3 BASIC16.89■□□□□ 0.29
USP50Q70EL3 MAX-218ENST00000557746 571 ntTSL 4 BASIC16.89■□□□□ 0.29
USP50Q70EL3 SRP14-208ENST00000560773 468 ntTSL 3 BASIC16.89■□□□□ 0.29
USP50Q70EL3 RN7SL602P-201ENST00000578326 324 ntBASIC16.89■□□□□ 0.29
USP50Q70EL3 RN7SL718P-201ENST00000581254 303 ntBASIC16.89■□□□□ 0.29
USP50Q70EL3 GGNBP1-204ENST00000613113 887 ntBASIC16.89■□□□□ 0.29
USP50Q70EL3 ESR1-214ENST00000638569 132 ntTSL 5 BASIC16.89■□□□□ 0.29
USP50Q70EL3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP50Q70EL3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.89■□□□□ 0.29
USP50Q70EL3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.89■□□□□ 0.29
USP50Q70EL3 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC16.89■□□□□ 0.29
USP50Q70EL3 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC16.89■□□□□ 0.29
USP50Q70EL3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
USP50Q70EL3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP50Q70EL3 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP50Q70EL3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP50Q70EL3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.89■□□□□ 0.29
USP50Q70EL3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP50Q70EL3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.89■□□□□ 0.29
USP50Q70EL3 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.89■□□□□ 0.29
USP50Q70EL3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.89■□□□□ 0.29
USP50Q70EL3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP50Q70EL3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.89■□□□□ 0.29
USP50Q70EL3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP50Q70EL3 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.88■□□□□ 0.29
USP50Q70EL3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
USP50Q70EL3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
USP50Q70EL3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP50Q70EL3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.88■□□□□ 0.29
USP50Q70EL3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
USP50Q70EL3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.88■□□□□ 0.29
USP50Q70EL3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP50Q70EL3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP50Q70EL3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
USP50Q70EL3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP50Q70EL3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP50Q70EL3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP50Q70EL3 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP50Q70EL3 SSR4-202ENST00000370085 526 ntTSL 2 BASIC16.88■□□□□ 0.29
USP50Q70EL3 OR2W2P-201ENST00000406313 909 ntBASIC16.88■□□□□ 0.29
USP50Q70EL3 AL137244.1-201ENST00000422931 865 ntBASIC16.88■□□□□ 0.29
USP50Q70EL3 IFNWP2-201ENST00000431203 580 ntBASIC16.88■□□□□ 0.29
USP50Q70EL3 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP50Q70EL3 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP50Q70EL3 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC16.88■□□□□ 0.29
USP50Q70EL3 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP50Q70EL3 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP50Q70EL3 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC16.88■□□□□ 0.29
USP50Q70EL3 DUT-207ENST00000559416 635 ntTSL 2 BASIC16.88■□□□□ 0.29
USP50Q70EL3 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC16.88■□□□□ 0.29
USP50Q70EL3 CMC2-204ENST00000562713 573 ntTSL 3 BASIC16.88■□□□□ 0.29
USP50Q70EL3 CMC2-209ENST00000565108 399 ntTSL 2 BASIC16.88■□□□□ 0.29
USP50Q70EL3 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC16.88■□□□□ 0.29
USP50Q70EL3 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
USP50Q70EL3 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC16.88■□□□□ 0.29
USP50Q70EL3 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP50Q70EL3 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC16.88■□□□□ 0.29
USP50Q70EL3 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP50Q70EL3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.88■□□□□ 0.29
USP50Q70EL3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP50Q70EL3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
USP50Q70EL3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
USP50Q70EL3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.88■□□□□ 0.29
USP50Q70EL3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
USP50Q70EL3 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP50Q70EL3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP50Q70EL3 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USP50Q70EL3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP50Q70EL3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP50Q70EL3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USP50Q70EL3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP50Q70EL3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP50Q70EL3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USP50Q70EL3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.87■□□□□ 0.29
USP50Q70EL3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.87■□□□□ 0.29
USP50Q70EL3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.87■□□□□ 0.29
USP50Q70EL3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.87■□□□□ 0.29
USP50Q70EL3 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
USP50Q70EL3 SNORA57-201ENST00000383870 149 ntBASIC16.87■□□□□ 0.29
USP50Q70EL3 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms