Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
VPS13CQ709C8 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
VPS13CQ709C8 AC006486.2-201ENST00000624246 2199 ntBASIC11.83□□□□□ -0.52
VPS13CQ709C8 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
VPS13CQ709C8 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC11.83□□□□□ -0.52
VPS13CQ709C8 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VPS13CQ709C8 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
VPS13CQ709C8 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VPS13CQ709C8 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VPS13CQ709C8 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
VPS13CQ709C8 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
VPS13CQ709C8 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
VPS13CQ709C8 AC027612.2-202ENST00000445955 1199 ntBASIC11.83□□□□□ -0.52
VPS13CQ709C8 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
VPS13CQ709C8 BMF-206ENST00000558774 671 ntTSL 3 BASIC11.83□□□□□ -0.52
VPS13CQ709C8 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC11.83□□□□□ -0.52
VPS13CQ709C8 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC11.83□□□□□ -0.52
VPS13CQ709C8 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VPS13CQ709C8 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC11.83□□□□□ -0.52
VPS13CQ709C8 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
VPS13CQ709C8 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
VPS13CQ709C8 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC11.83□□□□□ -0.52
VPS13CQ709C8 AGAP7P-201ENST00000582299 2062 ntBASIC11.83□□□□□ -0.52
VPS13CQ709C8 AGAP14-201ENST00000624701 2060 ntBASIC11.83□□□□□ -0.52
VPS13CQ709C8 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
VPS13CQ709C8 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC11.83□□□□□ -0.52
VPS13CQ709C8 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
VPS13CQ709C8 VENTXP4-201ENST00000449029 958 ntBASIC11.83□□□□□ -0.52
VPS13CQ709C8 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC11.83□□□□□ -0.52
VPS13CQ709C8 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC11.83□□□□□ -0.52
VPS13CQ709C8 AC005746.3-201ENST00000614751 393 ntBASIC11.83□□□□□ -0.52
VPS13CQ709C8 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VPS13CQ709C8 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
VPS13CQ709C8 CICP14-201ENST00000629111 2732 ntBASIC11.83□□□□□ -0.52
VPS13CQ709C8 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC11.83□□□□□ -0.52
VPS13CQ709C8 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
VPS13CQ709C8 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VPS13CQ709C8 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC11.83□□□□□ -0.52
VPS13CQ709C8 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VPS13CQ709C8 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
VPS13CQ709C8 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
VPS13CQ709C8 SNORA57-201ENST00000383870 149 ntBASIC11.82□□□□□ -0.52
VPS13CQ709C8 BAX-205ENST00000391871 687 ntTSL 5 BASIC11.82□□□□□ -0.52
VPS13CQ709C8 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC11.82□□□□□ -0.52
VPS13CQ709C8 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC11.82□□□□□ -0.52
VPS13CQ709C8 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC11.82□□□□□ -0.52
VPS13CQ709C8 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC11.82□□□□□ -0.52
VPS13CQ709C8 HPX-213ENST00000615166 826 ntTSL 5 BASIC11.82□□□□□ -0.52
VPS13CQ709C8 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13CQ709C8 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC11.82□□□□□ -0.52
VPS13CQ709C8 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC11.82□□□□□ -0.52
VPS13CQ709C8 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
VPS13CQ709C8 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13CQ709C8 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13CQ709C8 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13CQ709C8 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13CQ709C8 KRT8P18-201ENST00000413425 1445 ntBASIC11.82□□□□□ -0.52
VPS13CQ709C8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC11.82□□□□□ -0.52
VPS13CQ709C8 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC11.82□□□□□ -0.52
VPS13CQ709C8 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC11.82□□□□□ -0.52
VPS13CQ709C8 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC11.82□□□□□ -0.52
VPS13CQ709C8 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
VPS13CQ709C8 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC11.82□□□□□ -0.52
VPS13CQ709C8 AC004466.2-201ENST00000614749 516 ntBASIC11.82□□□□□ -0.52
VPS13CQ709C8 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13CQ709C8 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13CQ709C8 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC11.82□□□□□ -0.52
VPS13CQ709C8 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
VPS13CQ709C8 AC009093.10-201ENST00000641956 1442 ntBASIC11.82□□□□□ -0.52
VPS13CQ709C8 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC11.82□□□□□ -0.52
VPS13CQ709C8 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13CQ709C8 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13CQ709C8 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
VPS13CQ709C8 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC11.82□□□□□ -0.52
VPS13CQ709C8 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC11.82□□□□□ -0.52
VPS13CQ709C8 AC025594.1-201ENST00000469533 543 ntBASIC11.82□□□□□ -0.52
VPS13CQ709C8 ALG1L7P-201ENST00000502317 768 ntBASIC11.82□□□□□ -0.52
VPS13CQ709C8 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC11.82□□□□□ -0.52
VPS13CQ709C8 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC11.82□□□□□ -0.52
VPS13CQ709C8 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC11.82□□□□□ -0.52
VPS13CQ709C8 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
VPS13CQ709C8 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13CQ709C8 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.82□□□□□ -0.52
VPS13CQ709C8 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13CQ709C8 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC11.82□□□□□ -0.52
VPS13CQ709C8 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC11.82□□□□□ -0.52
VPS13CQ709C8 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13CQ709C8 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13CQ709C8 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13CQ709C8 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13CQ709C8 RN7SL173P-201ENST00000461853 292 ntBASIC11.81□□□□□ -0.52
VPS13CQ709C8 HINT1-205ENST00000508488 703 ntTSL 2 BASIC11.81□□□□□ -0.52
VPS13CQ709C8 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC11.81□□□□□ -0.52
VPS13CQ709C8 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
VPS13CQ709C8 HNRNPA1P16-201ENST00000575692 955 ntBASIC11.81□□□□□ -0.52
VPS13CQ709C8 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
VPS13CQ709C8 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC11.81□□□□□ -0.52
VPS13CQ709C8 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
VPS13CQ709C8 AC080013.5-201ENST00000607044 679 ntBASIC11.81□□□□□ -0.52
VPS13CQ709C8 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms