Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 AP001972.5-201ENST00000624624 2338 ntBASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 AC108073.2-201ENST00000464002 357 ntBASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 AC004790.2-201ENST00000623588 572 ntBASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 AC072061.1-201ENST00000569710 2234 ntBASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 ALK-205ENST00000618119 4646 ntTSL 5 BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 AC090643.2-201ENST00000623442 2029 ntBASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 AP002414.3-201ENST00000589352 1468 ntBASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 DDC-213ENST00000617822 1809 ntTSL 3 BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 FAM185BP-201ENST00000443595 716 ntBASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 AC109635.5-201ENST00000533593 962 ntBASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 AL031008.1-201ENST00000619963 541 ntBASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 AC117500.6-201ENST00000624871 588 ntBASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 AL645728.2-202ENST00000641679 227 ntBASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 AC107375.1-201ENST00000564464 2231 ntBASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms