Protein–RNA interactions for Protein: Q68CL5

TPGS2, Tubulin polyglutamylase complex subunit 2, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2Q68CL5 AGGF1P1-201ENST00000509500 2073 ntBASIC15.21■□□□□ 0.03
TPGS2Q68CL5 NORAD-201ENST00000565493 5339 ntBASIC15.21■□□□□ 0.03
TPGS2Q68CL5 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 MIR4522-201ENST00000584932 87 ntBASIC15.21■□□□□ 0.03
TPGS2Q68CL5 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 AC087392.5-201ENST00000612517 489 ntBASIC15.21■□□□□ 0.03
TPGS2Q68CL5 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TPGS2Q68CL5 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TPGS2Q68CL5 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.21■□□□□ 0.02
TPGS2Q68CL5 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TPGS2Q68CL5 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TPGS2Q68CL5 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TPGS2Q68CL5 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TPGS2Q68CL5 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TPGS2Q68CL5 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TPGS2Q68CL5 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPGS2Q68CL5 AC215219.1-201ENST00000400706 1817 ntBASIC15.2■□□□□ 0.02
TPGS2Q68CL5 AC064801.2-201ENST00000625052 1303 ntBASIC15.19■□□□□ 0.02
TPGS2Q68CL5 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TPGS2Q68CL5 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TPGS2Q68CL5 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
TPGS2Q68CL5 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TPGS2Q68CL5 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TPGS2Q68CL5 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TPGS2Q68CL5 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TPGS2Q68CL5 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TPGS2Q68CL5 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TPGS2Q68CL5 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms