Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO4Q2I0M5 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 PIFO-201ENST00000369737 746 ntTSL 2 BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 AC098657.1-201ENST00000416270 1135 ntBASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 OR2A1-AS1-210ENST00000496968 531 ntBASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 AC020904.3-201ENST00000624199 442 ntBASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO4Q2I0M5 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 ZBED1P1-201ENST00000502364 1930 ntBASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 ASS1P2-201ENST00000439895 1223 ntBASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 AC098934.1-203ENST00000442868 1262 ntBASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 AC003686.1-201ENST00000550956 1034 ntBASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 AC023968.2-201ENST00000560593 1049 ntBASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 NEK4P3-201ENST00000604859 544 ntBASIC14.05□□□□□ -0.16
RSPO4Q2I0M5 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms