Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PCDH1Q08174 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
PCDH1Q08174 RPL7P3-201ENST00000441388 714 ntBASIC14.19□□□□□ -0.14
PCDH1Q08174 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDH1Q08174 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.19□□□□□ -0.14
PCDH1Q08174 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
PCDH1Q08174 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCDH1Q08174 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.19□□□□□ -0.14
PCDH1Q08174 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.19□□□□□ -0.14
PCDH1Q08174 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.19□□□□□ -0.14
PCDH1Q08174 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PCDH1Q08174 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.19□□□□□ -0.14
PCDH1Q08174 AC138951.2-201ENST00000623455 1161 ntBASIC14.19□□□□□ -0.14
PCDH1Q08174 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDH1Q08174 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.19□□□□□ -0.14
PCDH1Q08174 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDH1Q08174 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDH1Q08174 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.19□□□□□ -0.14
PCDH1Q08174 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDH1Q08174 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCDH1Q08174 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDH1Q08174 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDH1Q08174 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDH1Q08174 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCDH1Q08174 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDH1Q08174 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCDH1Q08174 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCDH1Q08174 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCDH1Q08174 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PCDH1Q08174 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.19□□□□□ -0.14
PCDH1Q08174 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.19□□□□□ -0.14
PCDH1Q08174 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCDH1Q08174 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDH1Q08174 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PCDH1Q08174 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PCDH1Q08174 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
PCDH1Q08174 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDH1Q08174 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDH1Q08174 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.18□□□□□ -0.14
PCDH1Q08174 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDH1Q08174 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PCDH1Q08174 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDH1Q08174 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDH1Q08174 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDH1Q08174 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDH1Q08174 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDH1Q08174 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PCDH1Q08174 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDH1Q08174 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.18□□□□□ -0.14
PCDH1Q08174 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
PCDH1Q08174 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
PCDH1Q08174 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PCDH1Q08174 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDH1Q08174 BOLA2P3-201ENST00000404566 256 ntBASIC14.18□□□□□ -0.14
PCDH1Q08174 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.18□□□□□ -0.14
PCDH1Q08174 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.18□□□□□ -0.14
PCDH1Q08174 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDH1Q08174 AL355994.2-201ENST00000447882 704 ntBASIC14.18□□□□□ -0.14
PCDH1Q08174 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.18□□□□□ -0.14
PCDH1Q08174 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.18□□□□□ -0.14
PCDH1Q08174 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDH1Q08174 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.18□□□□□ -0.14
PCDH1Q08174 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.18□□□□□ -0.14
PCDH1Q08174 AC027237.1-201ENST00000560942 655 ntBASIC14.18□□□□□ -0.14
PCDH1Q08174 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.18□□□□□ -0.14
PCDH1Q08174 MIR4683-201ENST00000579659 81 ntBASIC14.18□□□□□ -0.14
PCDH1Q08174 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDH1Q08174 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.18□□□□□ -0.14
PCDH1Q08174 AC104506.1-201ENST00000609247 429 ntBASIC14.18□□□□□ -0.14
PCDH1Q08174 AL035252.4-201ENST00000624174 288 ntBASIC14.18□□□□□ -0.14
PCDH1Q08174 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDH1Q08174 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDH1Q08174 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PCDH1Q08174 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDH1Q08174 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PCDH1Q08174 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PCDH1Q08174 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDH1Q08174 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDH1Q08174 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PCDH1Q08174 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDH1Q08174 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PCDH1Q08174 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDH1Q08174 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDH1Q08174 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.17□□□□□ -0.14
PCDH1Q08174 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDH1Q08174 AHCYP2-201ENST00000430630 1300 ntBASIC14.17□□□□□ -0.14
PCDH1Q08174 AC064801.2-201ENST00000625052 1303 ntBASIC14.17□□□□□ -0.14
PCDH1Q08174 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.17□□□□□ -0.14
PCDH1Q08174 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDH1Q08174 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDH1Q08174 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDH1Q08174 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PCDH1Q08174 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDH1Q08174 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDH1Q08174 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDH1Q08174 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDH1Q08174 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.17□□□□□ -0.14
PCDH1Q08174 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDH1Q08174 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PCDH1Q08174 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms