Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCN7AQ01118 AC004554.1-201ENST00000422830 1468 ntBASIC17.7■□□□□ 0.42
SCN7AQ01118 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCN7AQ01118 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SCN7AQ01118 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.7■□□□□ 0.42
SCN7AQ01118 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SCN7AQ01118 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SCN7AQ01118 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SCN7AQ01118 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC17.7■□□□□ 0.42
SCN7AQ01118 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC17.7■□□□□ 0.42
SCN7AQ01118 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC17.7■□□□□ 0.42
SCN7AQ01118 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC17.7■□□□□ 0.42
SCN7AQ01118 TYMSP2-201ENST00000589501 424 ntBASIC17.7■□□□□ 0.42
SCN7AQ01118 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCN7AQ01118 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC17.7■□□□□ 0.42
SCN7AQ01118 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SCN7AQ01118 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC17.7■□□□□ 0.42
SCN7AQ01118 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SCN7AQ01118 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCN7AQ01118 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.7■□□□□ 0.42
SCN7AQ01118 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCN7AQ01118 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
SCN7AQ01118 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC17.7■□□□□ 0.42
SCN7AQ01118 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SCN7AQ01118 MTHFR-210ENST00000641407 2387 ntBASIC17.69■□□□□ 0.42
SCN7AQ01118 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN7AQ01118 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN7AQ01118 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC17.69■□□□□ 0.42
SCN7AQ01118 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SCN7AQ01118 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SCN7AQ01118 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SCN7AQ01118 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SCN7AQ01118 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC17.69■□□□□ 0.42
SCN7AQ01118 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.69■□□□□ 0.42
SCN7AQ01118 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN7AQ01118 TBC1D27-202ENST00000424239 1573 ntBASIC17.69■□□□□ 0.42
SCN7AQ01118 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN7AQ01118 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN7AQ01118 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCN7AQ01118 OR2W2P-201ENST00000406313 909 ntBASIC17.69■□□□□ 0.42
SCN7AQ01118 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC17.69■□□□□ 0.42
SCN7AQ01118 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC17.69■□□□□ 0.42
SCN7AQ01118 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC17.69■□□□□ 0.42
SCN7AQ01118 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC17.69■□□□□ 0.42
SCN7AQ01118 ESR1-214ENST00000638569 132 ntTSL 5 BASIC17.69■□□□□ 0.42
SCN7AQ01118 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.69■□□□□ 0.42
SCN7AQ01118 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.69■□□□□ 0.42
SCN7AQ01118 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN7AQ01118 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN7AQ01118 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SCN7AQ01118 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.69■□□□□ 0.42
SCN7AQ01118 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCN7AQ01118 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
SCN7AQ01118 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN7AQ01118 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN7AQ01118 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SCN7AQ01118 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN7AQ01118 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN7AQ01118 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCN7AQ01118 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN7AQ01118 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC17.68■□□□□ 0.42
SCN7AQ01118 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC17.68■□□□□ 0.42
SCN7AQ01118 GOLGA2P8-201ENST00000505201 779 ntBASIC17.68■□□□□ 0.42
SCN7AQ01118 IGHEP2-201ENST00000519308 1256 ntBASIC17.68■□□□□ 0.42
SCN7AQ01118 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SCN7AQ01118 CES1P2-201ENST00000566467 1242 ntBASIC17.68■□□□□ 0.42
SCN7AQ01118 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC17.68■□□□□ 0.42
SCN7AQ01118 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.68■□□□□ 0.42
SCN7AQ01118 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN7AQ01118 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SCN7AQ01118 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN7AQ01118 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.68■□□□□ 0.42
SCN7AQ01118 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SCN7AQ01118 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN7AQ01118 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC17.68■□□□□ 0.42
SCN7AQ01118 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCN7AQ01118 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SCN7AQ01118 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCN7AQ01118 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SCN7AQ01118 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN7AQ01118 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCN7AQ01118 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC17.68■□□□□ 0.42
SCN7AQ01118 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.68■□□□□ 0.42
SCN7AQ01118 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCN7AQ01118 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN7AQ01118 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SCN7AQ01118 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCN7AQ01118 SSR4-202ENST00000370085 526 ntTSL 2 BASIC17.67■□□□□ 0.42
SCN7AQ01118 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCN7AQ01118 OR51A9P-201ENST00000422578 911 ntBASIC17.67■□□□□ 0.42
SCN7AQ01118 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC17.67■□□□□ 0.42
SCN7AQ01118 GOLGA6L16P-201ENST00000441780 1299 ntBASIC17.67■□□□□ 0.42
SCN7AQ01118 AC092896.1-201ENST00000465850 380 ntBASIC17.67■□□□□ 0.42
SCN7AQ01118 RN7SL351P-201ENST00000469306 248 ntBASIC17.67■□□□□ 0.42
SCN7AQ01118 AC090136.2-201ENST00000517809 420 ntBASIC17.67■□□□□ 0.42
SCN7AQ01118 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC17.67■□□□□ 0.42
SCN7AQ01118 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC17.67■□□□□ 0.42
SCN7AQ01118 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCN7AQ01118 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCN7AQ01118 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms