Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
RPL39P62891 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
RPL39P62891 AC093525.8-201ENST00000624099 1342 ntBASIC10.44□□□□□ -0.74
RPL39P62891 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
RPL39P62891 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 PKIG-203ENST00000372887 769 ntTSL 3 BASIC10.44□□□□□ -0.74
RPL39P62891 AC004461.1-201ENST00000412461 403 ntBASIC10.44□□□□□ -0.74
RPL39P62891 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC10.44□□□□□ -0.74
RPL39P62891 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC10.44□□□□□ -0.74
RPL39P62891 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC10.44□□□□□ -0.74
RPL39P62891 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC10.44□□□□□ -0.74
RPL39P62891 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
RPL39P62891 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC10.44□□□□□ -0.74
RPL39P62891 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC10.44□□□□□ -0.74
RPL39P62891 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC10.44□□□□□ -0.74
RPL39P62891 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC10.44□□□□□ -0.74
RPL39P62891 BX640515.1-201ENST00000617215 977 ntBASIC10.44□□□□□ -0.74
RPL39P62891 AL513210.1-201ENST00000629608 234 ntBASIC10.44□□□□□ -0.74
RPL39P62891 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC10.44□□□□□ -0.74
RPL39P62891 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC10.44□□□□□ -0.74
RPL39P62891 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC10.44□□□□□ -0.74
RPL39P62891 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC10.44□□□□□ -0.74
RPL39P62891 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
RPL39P62891 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC10.44□□□□□ -0.74
RPL39P62891 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC10.44□□□□□ -0.74
RPL39P62891 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
RPL39P62891 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
RPL39P62891 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
RPL39P62891 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC10.43□□□□□ -0.74
RPL39P62891 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
RPL39P62891 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
RPL39P62891 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
RPL39P62891 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
RPL39P62891 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC10.43□□□□□ -0.74
RPL39P62891 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
RPL39P62891 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC10.43□□□□□ -0.74
RPL39P62891 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
RPL39P62891 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
RPL39P62891 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC10.43□□□□□ -0.74
RPL39P62891 RERG-209ENST00000546331 1383 ntTSL 2 BASIC10.43□□□□□ -0.74
RPL39P62891 AL136172.1-201ENST00000598590 1394 ntBASIC10.43□□□□□ -0.74
RPL39P62891 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC10.43□□□□□ -0.74
RPL39P62891 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
RPL39P62891 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
RPL39P62891 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC10.43□□□□□ -0.74
RPL39P62891 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 AC004945.1-201ENST00000416738 983 ntBASIC10.43□□□□□ -0.74
RPL39P62891 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC10.43□□□□□ -0.74
RPL39P62891 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC10.43□□□□□ -0.74
RPL39P62891 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC10.43□□□□□ -0.74
RPL39P62891 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC10.43□□□□□ -0.74
RPL39P62891 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC10.43□□□□□ -0.74
RPL39P62891 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC10.43□□□□□ -0.74
RPL39P62891 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC10.43□□□□□ -0.74
RPL39P62891 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC10.43□□□□□ -0.74
RPL39P62891 RN7SL618P-201ENST00000477850 296 ntBASIC10.43□□□□□ -0.74
RPL39P62891 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC10.43□□□□□ -0.74
RPL39P62891 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC10.43□□□□□ -0.74
RPL39P62891 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC10.43□□□□□ -0.74
RPL39P62891 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
RPL39P62891 AC051619.7-201ENST00000568314 623 ntBASIC10.43□□□□□ -0.74
RPL39P62891 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms