Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
AP1S1P61966 AC091804.1-201ENST00000486888 567 ntBASIC14.75□□□□□ -0.05
AP1S1P61966 AP001258.2-201ENST00000529891 490 ntBASIC14.75□□□□□ -0.05
AP1S1P61966 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP1S1P61966 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.75□□□□□ -0.05
AP1S1P61966 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
AP1S1P61966 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
AP1S1P61966 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.75□□□□□ -0.05
AP1S1P61966 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.75□□□□□ -0.05
AP1S1P61966 AC068587.8-201ENST00000641239 219 ntBASIC14.75□□□□□ -0.05
AP1S1P61966 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP1S1P61966 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP1S1P61966 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP1S1P61966 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP1S1P61966 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP1S1P61966 AC090505.1-201ENST00000430515 1834 ntBASIC14.75□□□□□ -0.05
AP1S1P61966 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.75□□□□□ -0.05
AP1S1P61966 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
AP1S1P61966 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
AP1S1P61966 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
AP1S1P61966 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
AP1S1P61966 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.74□□□□□ -0.05
AP1S1P61966 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP1S1P61966 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
AP1S1P61966 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
AP1S1P61966 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP1S1P61966 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP1S1P61966 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
AP1S1P61966 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
AP1S1P61966 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP1S1P61966 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
AP1S1P61966 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
AP1S1P61966 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.74□□□□□ -0.05
AP1S1P61966 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.74□□□□□ -0.05
AP1S1P61966 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP1S1P61966 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
AP1S1P61966 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
AP1S1P61966 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP1S1P61966 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP1S1P61966 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.74□□□□□ -0.05
AP1S1P61966 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.74□□□□□ -0.05
AP1S1P61966 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.74□□□□□ -0.05
AP1S1P61966 HLA-J-204ENST00000495278 958 ntBASIC14.74□□□□□ -0.05
AP1S1P61966 SCARNA21-201ENST00000517026 139 ntBASIC14.74□□□□□ -0.05
AP1S1P61966 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.74□□□□□ -0.05
AP1S1P61966 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.74□□□□□ -0.05
AP1S1P61966 AC013355.1-201ENST00000562625 723 ntBASIC14.74□□□□□ -0.05
AP1S1P61966 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.74□□□□□ -0.05
AP1S1P61966 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.74□□□□□ -0.05
AP1S1P61966 MIR4525-201ENST00000580000 75 ntBASIC14.74□□□□□ -0.05
AP1S1P61966 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.74□□□□□ -0.05
AP1S1P61966 AC090164.2-201ENST00000611487 516 ntBASIC14.74□□□□□ -0.05
AP1S1P61966 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP1S1P61966 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.74□□□□□ -0.05
AP1S1P61966 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
AP1S1P61966 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.74□□□□□ -0.05
AP1S1P61966 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP1S1P61966 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.74□□□□□ -0.05
AP1S1P61966 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP1S1P61966 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
AP1S1P61966 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP1S1P61966 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP1S1P61966 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
AP1S1P61966 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP1S1P61966 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP1S1P61966 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP1S1P61966 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP1S1P61966 FAM90A7P-201ENST00000382628 1395 ntBASIC14.73□□□□□ -0.05
AP1S1P61966 FAM90A23P-201ENST00000400136 1395 ntBASIC14.73□□□□□ -0.05
AP1S1P61966 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
AP1S1P61966 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
AP1S1P61966 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP1S1P61966 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP1S1P61966 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP1S1P61966 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.73□□□□□ -0.05
AP1S1P61966 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP1S1P61966 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP1S1P61966 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
AP1S1P61966 RN7SL832P-201ENST00000607781 1756 ntBASIC14.73□□□□□ -0.05
AP1S1P61966 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.73□□□□□ -0.05
AP1S1P61966 AC064801.2-201ENST00000625052 1303 ntBASIC14.73□□□□□ -0.05
AP1S1P61966 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
AP1S1P61966 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.73□□□□□ -0.05
AP1S1P61966 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.73□□□□□ -0.05
AP1S1P61966 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP1S1P61966 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
AP1S1P61966 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP1S1P61966 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP1S1P61966 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.73□□□□□ -0.05
AP1S1P61966 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP1S1P61966 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.73□□□□□ -0.05
AP1S1P61966 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.73□□□□□ -0.05
AP1S1P61966 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
AP1S1P61966 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.73□□□□□ -0.05
AP1S1P61966 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
AP1S1P61966 AC044849.1-201ENST00000519737 1188 ntBASIC14.73□□□□□ -0.05
AP1S1P61966 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.73□□□□□ -0.05
AP1S1P61966 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
AP1S1P61966 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.73□□□□□ -0.05
AP1S1P61966 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms