Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC10.76□□□□□ -0.69
APOC4P55056 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
APOC4P55056 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
APOC4P55056 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC10.76□□□□□ -0.69
APOC4P55056 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
APOC4P55056 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC10.76□□□□□ -0.69
APOC4P55056 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 NPPA-201ENST00000376476 728 ntTSL 3 BASIC10.76□□□□□ -0.69
APOC4P55056 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 AL157407.1-201ENST00000435784 904 ntBASIC10.76□□□□□ -0.69
APOC4P55056 AC104073.2-201ENST00000453737 312 ntBASIC10.76□□□□□ -0.69
APOC4P55056 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC10.76□□□□□ -0.69
APOC4P55056 AC022217.1-201ENST00000521069 738 ntBASIC10.76□□□□□ -0.69
APOC4P55056 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC10.76□□□□□ -0.69
APOC4P55056 NEU3-202ENST00000526068 431 ntTSL 2 BASIC10.76□□□□□ -0.69
APOC4P55056 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC10.76□□□□□ -0.69
APOC4P55056 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC10.76□□□□□ -0.69
APOC4P55056 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC10.76□□□□□ -0.69
APOC4P55056 CSH2-206ENST00000560142 749 ntTSL 5 BASIC10.76□□□□□ -0.69
APOC4P55056 KLK3-207ENST00000595952 969 ntTSL 3 BASIC10.76□□□□□ -0.69
APOC4P55056 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC10.76□□□□□ -0.69
APOC4P55056 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC10.76□□□□□ -0.69
APOC4P55056 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC10.76□□□□□ -0.69
APOC4P55056 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC10.76□□□□□ -0.69
APOC4P55056 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC10.76□□□□□ -0.69
APOC4P55056 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC10.76□□□□□ -0.69
APOC4P55056 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
APOC4P55056 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
APOC4P55056 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC10.76□□□□□ -0.69
APOC4P55056 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
APOC4P55056 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
APOC4P55056 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 AL157791.1-201ENST00000553667 1699 ntBASIC10.76□□□□□ -0.69
APOC4P55056 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC10.76□□□□□ -0.69
APOC4P55056 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC10.76□□□□□ -0.69
APOC4P55056 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
APOC4P55056 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC10.75□□□□□ -0.69
APOC4P55056 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC10.75□□□□□ -0.69
APOC4P55056 TCAF2P1-201ENST00000291129 2421 ntBASIC10.75□□□□□ -0.69
APOC4P55056 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
APOC4P55056 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC10.75□□□□□ -0.69
APOC4P55056 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC10.75□□□□□ -0.69
APOC4P55056 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC10.75□□□□□ -0.69
APOC4P55056 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC10.75□□□□□ -0.69
APOC4P55056 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
APOC4P55056 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
APOC4P55056 RN7SKP214-201ENST00000364208 315 ntBASIC10.75□□□□□ -0.69
APOC4P55056 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC10.75□□□□□ -0.69
APOC4P55056 KRTAP19-9P-201ENST00000421795 191 ntBASIC10.75□□□□□ -0.69
APOC4P55056 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC10.75□□□□□ -0.69
APOC4P55056 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 AC006335.1-201ENST00000445200 547 ntBASIC10.75□□□□□ -0.69
APOC4P55056 IGHJ2P-201ENST00000454480 60 ntBASIC10.75□□□□□ -0.69
APOC4P55056 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC10.75□□□□□ -0.69
APOC4P55056 HIST2H2BC-201ENST00000498492 580 ntBASIC10.75□□□□□ -0.69
APOC4P55056 RCC2P8-201ENST00000502779 1035 ntBASIC10.75□□□□□ -0.69
APOC4P55056 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC10.75□□□□□ -0.69
APOC4P55056 FADS2-212ENST00000522639 360 ntTSL 5 BASIC10.75□□□□□ -0.69
APOC4P55056 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC10.75□□□□□ -0.69
APOC4P55056 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC10.75□□□□□ -0.69
APOC4P55056 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC10.75□□□□□ -0.69
APOC4P55056 ACTG1P17-201ENST00000558391 1119 ntBASIC10.75□□□□□ -0.69
APOC4P55056 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC10.75□□□□□ -0.69
APOC4P55056 IGHV3OR16-16-201ENST00000563644 343 ntBASIC10.75□□□□□ -0.69
APOC4P55056 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC10.75□□□□□ -0.69
APOC4P55056 FADS2-215ENST00000574708 385 ntTSL 3 BASIC10.75□□□□□ -0.69
APOC4P55056 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms