Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PSMD4P55036 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.74□□□□□ -0.21
PSMD4P55036 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
PSMD4P55036 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.74□□□□□ -0.21
PSMD4P55036 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PSMD4P55036 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.74□□□□□ -0.21
PSMD4P55036 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.74□□□□□ -0.21
PSMD4P55036 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PSMD4P55036 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
PSMD4P55036 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PSMD4P55036 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.74□□□□□ -0.21
PSMD4P55036 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PSMD4P55036 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
PSMD4P55036 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PSMD4P55036 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.74□□□□□ -0.21
PSMD4P55036 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.74□□□□□ -0.21
PSMD4P55036 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
PSMD4P55036 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PSMD4P55036 RN7SKP230-201ENST00000365642 335 ntBASIC13.74□□□□□ -0.21
PSMD4P55036 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
PSMD4P55036 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PSMD4P55036 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
PSMD4P55036 AL590640.2-201ENST00000457038 527 ntBASIC13.74□□□□□ -0.21
PSMD4P55036 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.74□□□□□ -0.21
PSMD4P55036 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.74□□□□□ -0.21
PSMD4P55036 GCOM2-201ENST00000509133 1104 ntBASIC13.74□□□□□ -0.21
PSMD4P55036 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PSMD4P55036 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.74□□□□□ -0.21
PSMD4P55036 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
PSMD4P55036 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.74□□□□□ -0.21
PSMD4P55036 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.74□□□□□ -0.21
PSMD4P55036 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PSMD4P55036 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PSMD4P55036 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
PSMD4P55036 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PSMD4P55036 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PSMD4P55036 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PSMD4P55036 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PSMD4P55036 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PSMD4P55036 AC139749.1-202ENST00000617529 3139 ntBASIC13.74□□□□□ -0.21
PSMD4P55036 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.74□□□□□ -0.21
PSMD4P55036 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.74□□□□□ -0.21
PSMD4P55036 BX640514.1-201ENST00000583223 1918 ntBASIC13.74□□□□□ -0.21
PSMD4P55036 AC131212.3-201ENST00000624087 4219 ntBASIC13.74□□□□□ -0.21
PSMD4P55036 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PSMD4P55036 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PSMD4P55036 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PSMD4P55036 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PSMD4P55036 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PSMD4P55036 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PSMD4P55036 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PSMD4P55036 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
PSMD4P55036 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PSMD4P55036 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PSMD4P55036 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PSMD4P55036 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.73□□□□□ -0.21
PSMD4P55036 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PSMD4P55036 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.73□□□□□ -0.21
PSMD4P55036 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PSMD4P55036 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PSMD4P55036 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
PSMD4P55036 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PSMD4P55036 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.73□□□□□ -0.21
PSMD4P55036 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PSMD4P55036 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PSMD4P55036 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PSMD4P55036 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.73□□□□□ -0.21
PSMD4P55036 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PSMD4P55036 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PSMD4P55036 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PSMD4P55036 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PSMD4P55036 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PSMD4P55036 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PSMD4P55036 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.73□□□□□ -0.21
PSMD4P55036 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PSMD4P55036 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.73□□□□□ -0.21
PSMD4P55036 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
PSMD4P55036 RN7SKP175-201ENST00000408472 289 ntBASIC13.73□□□□□ -0.21
PSMD4P55036 COX5BP1-201ENST00000507622 393 ntBASIC13.73□□□□□ -0.21
PSMD4P55036 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
PSMD4P55036 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.73□□□□□ -0.21
PSMD4P55036 BX088702.1-201ENST00000610784 235 ntBASIC13.73□□□□□ -0.21
PSMD4P55036 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PSMD4P55036 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PSMD4P55036 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
PSMD4P55036 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PSMD4P55036 PDIA3P1-201ENST00000471856 1510 ntBASIC13.73□□□□□ -0.21
PSMD4P55036 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PSMD4P55036 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
PSMD4P55036 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PSMD4P55036 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.73□□□□□ -0.21
PSMD4P55036 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PSMD4P55036 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.73□□□□□ -0.21
PSMD4P55036 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.73□□□□□ -0.21
PSMD4P55036 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PSMD4P55036 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.73□□□□□ -0.21
PSMD4P55036 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PSMD4P55036 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
PSMD4P55036 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PSMD4P55036 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms