Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN5P54829 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN5P54829 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN5P54829 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
PTPN5P54829 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN5P54829 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN5P54829 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN5P54829 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN5P54829 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.22■□□□□ 0.03
PTPN5P54829 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.22■□□□□ 0.03
PTPN5P54829 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PTPN5P54829 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PTPN5P54829 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN5P54829 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN5P54829 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
PTPN5P54829 DBET-201ENST00000630918 3363 ntBASIC15.21■□□□□ 0.03
PTPN5P54829 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN5P54829 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN5P54829 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
PTPN5P54829 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN5P54829 KRT8P14-201ENST00000414254 1442 ntBASIC15.21■□□□□ 0.03
PTPN5P54829 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
PTPN5P54829 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
PTPN5P54829 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN5P54829 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN5P54829 OR2K2-202ENST00000374428 1038 ntBASIC15.21■□□□□ 0.03
PTPN5P54829 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
PTPN5P54829 NPM1P28-201ENST00000492269 840 ntBASIC15.21■□□□□ 0.03
PTPN5P54829 AC009779.1-201ENST00000551138 283 ntBASIC15.21■□□□□ 0.03
PTPN5P54829 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
PTPN5P54829 AC026803.1-201ENST00000569130 274 ntBASIC15.21■□□□□ 0.03
PTPN5P54829 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.21■□□□□ 0.03
PTPN5P54829 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PTPN5P54829 MIR5196-201ENST00000578146 115 ntBASIC15.21■□□□□ 0.03
PTPN5P54829 MIR4472-1-201ENST00000584349 80 ntBASIC15.21■□□□□ 0.03
PTPN5P54829 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN5P54829 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN5P54829 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN5P54829 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN5P54829 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN5P54829 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PTPN5P54829 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN5P54829 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN5P54829 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.21■□□□□ 0.03
PTPN5P54829 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PTPN5P54829 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
PTPN5P54829 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
PTPN5P54829 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.21■□□□□ 0.02
PTPN5P54829 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PTPN5P54829 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PTPN5P54829 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
PTPN5P54829 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC15.21■□□□□ 0.02
PTPN5P54829 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.21■□□□□ 0.02
PTPN5P54829 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
PTPN5P54829 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PTPN5P54829 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN5P54829 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN5P54829 MRPL37P1-201ENST00000592451 1337 ntBASIC15.2■□□□□ 0.02
PTPN5P54829 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN5P54829 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PTPN5P54829 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN5P54829 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN5P54829 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN5P54829 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN5P54829 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
PTPN5P54829 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
PTPN5P54829 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PTPN5P54829 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.2■□□□□ 0.02
PTPN5P54829 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN5P54829 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PTPN5P54829 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN5P54829 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN5P54829 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN5P54829 UROS-201ENST00000368774 744 ntTSL 2 BASIC15.2■□□□□ 0.02
PTPN5P54829 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC15.2■□□□□ 0.02
PTPN5P54829 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PTPN5P54829 HLA-K-203ENST00000430151 1046 ntBASIC15.2■□□□□ 0.02
PTPN5P54829 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC15.2■□□□□ 0.02
PTPN5P54829 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN5P54829 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.2■□□□□ 0.02
PTPN5P54829 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PTPN5P54829 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN5P54829 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PTPN5P54829 AC115989.2-201ENST00000578640 563 ntBASIC15.2■□□□□ 0.02
PTPN5P54829 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC15.2■□□□□ 0.02
PTPN5P54829 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.2■□□□□ 0.02
PTPN5P54829 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PTPN5P54829 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PTPN5P54829 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PTPN5P54829 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PTPN5P54829 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PTPN5P54829 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PTPN5P54829 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PTPN5P54829 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN5P54829 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN5P54829 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.2■□□□□ 0.02
PTPN5P54829 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.2■□□□□ 0.02
PTPN5P54829 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN5P54829 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN5P54829 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms