Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 FGF14-AS2-201ENST00000606448 1074 ntBASIC12.47□□□□□ -0.41
NKX2-5P52952 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 C17orf53-202ENST00000319977 2725 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC12.47□□□□□ -0.41
NKX2-5P52952 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC12.47□□□□□ -0.41
NKX2-5P52952 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC12.47□□□□□ -0.41
NKX2-5P52952 TMPRSS13-205ENST00000526090 2592 ntTSL 2 BASIC12.47□□□□□ -0.41
NKX2-5P52952 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
NKX2-5P52952 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 RBMXL3-201ENST00000424776 3442 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
NKX2-5P52952 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
NKX2-5P52952 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 CPT1C-203ENST00000392518 2910 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
NKX2-5P52952 GSN-205ENST00000373823 3341 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
NKX2-5P52952 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.47□□□□□ -0.41
NKX2-5P52952 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.47□□□□□ -0.41
NKX2-5P52952 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-5P52952 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC12.46□□□□□ -0.41
NKX2-5P52952 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
NKX2-5P52952 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-5P52952 IL17REL-201ENST00000341280 3500 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
NKX2-5P52952 SPOCK3-203ENST00000421836 3061 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
NKX2-5P52952 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-5P52952 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-5P52952 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-5P52952 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-5P52952 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-5P52952 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC12.46□□□□□ -0.41
NKX2-5P52952 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-5P52952 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-5P52952 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
NKX2-5P52952 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC12.46□□□□□ -0.41
NKX2-5P52952 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-5P52952 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-5P52952 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.46□□□□□ -0.41
NKX2-5P52952 PMS2P7-201ENST00000506558 1336 ntBASIC12.46□□□□□ -0.41
NKX2-5P52952 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
NKX2-5P52952 PSAP-201ENST00000394934 2830 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
NKX2-5P52952 EGLN3-205ENST00000547327 2849 ntBASIC12.46□□□□□ -0.41
NKX2-5P52952 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.46□□□□□ -0.41
NKX2-5P52952 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
NKX2-5P52952 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-5P52952 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-5P52952 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-5P52952 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-5P52952 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-5P52952 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-5P52952 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-5P52952 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
NKX2-5P52952 TSPY22P-201ENST00000427496 604 ntBASIC12.46□□□□□ -0.41
NKX2-5P52952 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-5P52952 PRYP5-201ENST00000451909 266 ntBASIC12.46□□□□□ -0.41
NKX2-5P52952 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.46□□□□□ -0.41
NKX2-5P52952 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC12.46□□□□□ -0.41
NKX2-5P52952 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
NKX2-5P52952 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.46□□□□□ -0.41
NKX2-5P52952 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC12.46□□□□□ -0.41
NKX2-5P52952 CLN6-221ENST00000637494 765 ntTSL 5 BASIC12.46□□□□□ -0.41
NKX2-5P52952 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-5P52952 KIF28P-202ENST00000504864 3064 ntBASIC12.46□□□□□ -0.41
NKX2-5P52952 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-5P52952 AL359845.1-201ENST00000458202 1648 ntBASIC12.46□□□□□ -0.41
NKX2-5P52952 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC12.46□□□□□ -0.41
NKX2-5P52952 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX2-5P52952 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC12.46□□□□□ -0.41
NKX2-5P52952 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
NKX2-5P52952 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
NKX2-5P52952 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
NKX2-5P52952 AL162231.4-201ENST00000564224 3264 ntTSL 2 BASIC12.46□□□□□ -0.42
NKX2-5P52952 AC237221.1-202ENST00000563054 2947 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
NKX2-5P52952 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NKX2-5P52952 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.46□□□□□ -0.42
NKX2-5P52952 AL928654.5-201ENST00000624831 2501 ntBASIC12.46□□□□□ -0.42
NKX2-5P52952 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
NKX2-5P52952 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
NKX2-5P52952 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NKX2-5P52952 NLRP7-206ENST00000588756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
NKX2-5P52952 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NKX2-5P52952 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
NKX2-5P52952 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC12.46□□□□□ -0.42
NKX2-5P52952 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC12.46□□□□□ -0.42
NKX2-5P52952 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
NKX2-5P52952 SPATA2-201ENST00000289431 4022 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NKX2-5P52952 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC12.46□□□□□ -0.42
NKX2-5P52952 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-5P52952 ANKRD27-204ENST00000587352 3301 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-5P52952 CD99L2-203ENST00000370377 3604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-5P52952 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-5P52952 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC12.45□□□□□ -0.42
NKX2-5P52952 ZIK1-202ENST00000536878 4144 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
NKX2-5P52952 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.45□□□□□ -0.42
NKX2-5P52952 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-5P52952 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-5P52952 CAGE1-201ENST00000296742 2821 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-5P52952 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms