Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.39□□□□□ -0.27
HMGA2P52926 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.39□□□□□ -0.27
HMGA2P52926 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.39□□□□□ -0.27
HMGA2P52926 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HMGA2P52926 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
HMGA2P52926 COL6A4P2-202ENST00000504443 2753 ntBASIC13.39□□□□□ -0.27
HMGA2P52926 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.39□□□□□ -0.27
HMGA2P52926 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
HMGA2P52926 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
HMGA2P52926 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
HMGA2P52926 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
HMGA2P52926 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
HMGA2P52926 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
HMGA2P52926 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
HMGA2P52926 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.39□□□□□ -0.27
HMGA2P52926 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.39□□□□□ -0.27
HMGA2P52926 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
HMGA2P52926 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 AC009093.10-201ENST00000641956 1442 ntBASIC13.39□□□□□ -0.27
HMGA2P52926 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HMGA2P52926 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HMGA2P52926 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
HMGA2P52926 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HMGA2P52926 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.38□□□□□ -0.27
HMGA2P52926 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.38□□□□□ -0.27
HMGA2P52926 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.38□□□□□ -0.27
HMGA2P52926 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HMGA2P52926 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.38□□□□□ -0.27
HMGA2P52926 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HMGA2P52926 AL391825.1-201ENST00000457671 1364 ntBASIC13.38□□□□□ -0.27
HMGA2P52926 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HMGA2P52926 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HMGA2P52926 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.38□□□□□ -0.27
HMGA2P52926 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HMGA2P52926 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.38□□□□□ -0.27
HMGA2P52926 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
HMGA2P52926 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.38□□□□□ -0.27
HMGA2P52926 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.38□□□□□ -0.27
HMGA2P52926 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.38□□□□□ -0.27
HMGA2P52926 AC123567.1-201ENST00000548294 1261 ntBASIC13.38□□□□□ -0.27
HMGA2P52926 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.38□□□□□ -0.27
HMGA2P52926 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.38□□□□□ -0.27
HMGA2P52926 AL691403.2-201ENST00000618460 490 ntBASIC13.38□□□□□ -0.27
HMGA2P52926 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.38□□□□□ -0.27
HMGA2P52926 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.38□□□□□ -0.27
HMGA2P52926 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HMGA2P52926 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HMGA2P52926 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HMGA2P52926 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.38□□□□□ -0.27
HMGA2P52926 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
HMGA2P52926 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HMGA2P52926 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HMGA2P52926 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HMGA2P52926 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HMGA2P52926 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HMGA2P52926 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HMGA2P52926 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HMGA2P52926 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.38□□□□□ -0.27
HMGA2P52926 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
HMGA2P52926 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HMGA2P52926 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HMGA2P52926 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HMGA2P52926 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HMGA2P52926 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HMGA2P52926 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
HMGA2P52926 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.38□□□□□ -0.27
HMGA2P52926 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HMGA2P52926 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.37□□□□□ -0.27
HMGA2P52926 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HMGA2P52926 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
HMGA2P52926 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.37□□□□□ -0.27
HMGA2P52926 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.37□□□□□ -0.27
HMGA2P52926 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
HMGA2P52926 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HMGA2P52926 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
HMGA2P52926 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HMGA2P52926 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.37□□□□□ -0.27
HMGA2P52926 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.37□□□□□ -0.27
HMGA2P52926 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HMGA2P52926 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HMGA2P52926 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HMGA2P52926 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.37□□□□□ -0.27
HMGA2P52926 RN7SKP175-201ENST00000408472 289 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms