Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.45□□□□□ -0.26
CENPAP49450 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.45□□□□□ -0.26
CENPAP49450 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.45□□□□□ -0.26
CENPAP49450 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.45□□□□□ -0.26
CENPAP49450 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.45□□□□□ -0.26
CENPAP49450 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.45□□□□□ -0.26
CENPAP49450 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 AC004790.1-201ENST00000612686 536 ntBASIC13.45□□□□□ -0.26
CENPAP49450 PRSS30P-206ENST00000641773 873 ntBASIC13.45□□□□□ -0.26
CENPAP49450 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CENPAP49450 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CENPAP49450 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CENPAP49450 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC13.45□□□□□ -0.26
CENPAP49450 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.45□□□□□ -0.26
CENPAP49450 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.45□□□□□ -0.26
CENPAP49450 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CENPAP49450 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.44□□□□□ -0.26
CENPAP49450 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CENPAP49450 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.44□□□□□ -0.26
CENPAP49450 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CENPAP49450 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
CENPAP49450 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CENPAP49450 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CENPAP49450 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CENPAP49450 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CENPAP49450 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CENPAP49450 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CENPAP49450 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC13.44□□□□□ -0.26
CENPAP49450 INTS4P2-202ENST00000614726 2019 ntBASIC13.44□□□□□ -0.26
CENPAP49450 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CENPAP49450 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC13.44□□□□□ -0.26
CENPAP49450 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CENPAP49450 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CENPAP49450 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CENPAP49450 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.44□□□□□ -0.26
CENPAP49450 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CENPAP49450 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.44□□□□□ -0.26
CENPAP49450 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CENPAP49450 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CENPAP49450 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.44□□□□□ -0.26
CENPAP49450 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CENPAP49450 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CENPAP49450 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CENPAP49450 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CENPAP49450 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CENPAP49450 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CENPAP49450 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
CENPAP49450 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CENPAP49450 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.44□□□□□ -0.26
CENPAP49450 C1QBPP1-201ENST00000400117 770 ntBASIC13.44□□□□□ -0.26
CENPAP49450 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.44□□□□□ -0.26
CENPAP49450 HLA-K-203ENST00000430151 1046 ntBASIC13.44□□□□□ -0.26
CENPAP49450 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC13.44□□□□□ -0.26
CENPAP49450 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.44□□□□□ -0.26
CENPAP49450 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.44□□□□□ -0.26
CENPAP49450 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CENPAP49450 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CENPAP49450 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CENPAP49450 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.44□□□□□ -0.26
CENPAP49450 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CENPAP49450 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CENPAP49450 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.44□□□□□ -0.26
CENPAP49450 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CENPAP49450 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CENPAP49450 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.44□□□□□ -0.26
CENPAP49450 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.44□□□□□ -0.26
CENPAP49450 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CENPAP49450 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CENPAP49450 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CENPAP49450 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CENPAP49450 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CENPAP49450 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CENPAP49450 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CENPAP49450 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.44□□□□□ -0.26
CENPAP49450 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CENPAP49450 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CENPAP49450 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CENPAP49450 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.43□□□□□ -0.26
CENPAP49450 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.43□□□□□ -0.26
CENPAP49450 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.43□□□□□ -0.26
CENPAP49450 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
CENPAP49450 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CENPAP49450 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.43□□□□□ -0.26
CENPAP49450 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CENPAP49450 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC13.43□□□□□ -0.26
CENPAP49450 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CENPAP49450 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms