Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AC025048.3-201ENST00000590609 569 ntBASIC11.69□□□□□ -0.54
CDC34P49427 AC005702.4-201ENST00000618393 416 ntBASIC11.69□□□□□ -0.54
CDC34P49427 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC11.69□□□□□ -0.54
CDC34P49427 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC11.69□□□□□ -0.54
CDC34P49427 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC11.69□□□□□ -0.54
CDC34P49427 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
CDC34P49427 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
CDC34P49427 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
CDC34P49427 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC11.69□□□□□ -0.54
CDC34P49427 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC11.69□□□□□ -0.54
CDC34P49427 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC11.69□□□□□ -0.54
CDC34P49427 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
CDC34P49427 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
CDC34P49427 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
CDC34P49427 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
CDC34P49427 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
CDC34P49427 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
CDC34P49427 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC11.68□□□□□ -0.54
CDC34P49427 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 AC131902.2-201ENST00000566892 2172 ntBASIC11.68□□□□□ -0.54
CDC34P49427 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
CDC34P49427 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC11.68□□□□□ -0.54
CDC34P49427 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC11.68□□□□□ -0.54
CDC34P49427 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC11.68□□□□□ -0.54
CDC34P49427 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
CDC34P49427 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC11.68□□□□□ -0.54
CDC34P49427 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC11.68□□□□□ -0.54
CDC34P49427 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC11.68□□□□□ -0.54
CDC34P49427 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC11.68□□□□□ -0.54
CDC34P49427 AC026150.2-201ENST00000564693 1156 ntBASIC11.68□□□□□ -0.54
CDC34P49427 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC11.68□□□□□ -0.54
CDC34P49427 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
CDC34P49427 MIR6074-201ENST00000612054 107 ntBASIC11.68□□□□□ -0.54
CDC34P49427 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC11.68□□□□□ -0.54
CDC34P49427 CITED2-204ENST00000618718 901 ntTSL 2 BASIC11.68□□□□□ -0.54
CDC34P49427 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC11.68□□□□□ -0.54
CDC34P49427 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
CDC34P49427 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
CDC34P49427 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
CDC34P49427 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC11.68□□□□□ -0.54
CDC34P49427 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
CDC34P49427 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC34P49427 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC11.67□□□□□ -0.54
CDC34P49427 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC11.67□□□□□ -0.54
CDC34P49427 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC34P49427 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC34P49427 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CDC34P49427 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC11.67□□□□□ -0.54
CDC34P49427 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
CDC34P49427 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC11.67□□□□□ -0.54
CDC34P49427 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC34P49427 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
CDC34P49427 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CDC34P49427 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CDC34P49427 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC11.67□□□□□ -0.54
CDC34P49427 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms