Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 GBP2-201ENST00000370466 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 AL355916.1-202ENST00000508827 5103 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 AC055813.1-201ENST00000587110 2123 ntBASIC9.56□□□□□ -0.88
PCP4P48539 AL132656.4-201ENST00000623504 2122 ntBASIC9.56□□□□□ -0.88
PCP4P48539 FUT10-211ENST00000524021 2042 ntTSL 2 BASIC9.56□□□□□ -0.88
PCP4P48539 RYR2-202ENST00000366574 16562 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 ZNF793-209ENST00000589319 1915 ntTSL 5 BASIC9.56□□□□□ -0.88
PCP4P48539 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC9.56□□□□□ -0.88
PCP4P48539 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 AC068234.1-201ENST00000560629 2785 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
PCP4P48539 MLC1-202ENST00000395876 3601 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC9.56□□□□□ -0.88
PCP4P48539 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
PCP4P48539 TXNDC15-201ENST00000358387 3548 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 ELMSAN1-204ENST00000423556 3547 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
PCP4P48539 RABL2A-207ENST00000409875 2282 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 LCTL-201ENST00000341509 3147 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PCP4P48539 MIS18BP1-201ENST00000310806 4777 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
PCP4P48539 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
PCP4P48539 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC9.55□□□□□ -0.88
PCP4P48539 UPRT-202ENST00000373379 2234 ntTSL 2 BASIC9.55□□□□□ -0.88
PCP4P48539 TPT1-212ENST00000530705 4735 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
PCP4P48539 HEXA-AS1-201ENST00000567598 2676 ntBASIC9.55□□□□□ -0.88
PCP4P48539 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
PCP4P48539 AC009163.7-201ENST00000621929 2557 ntBASIC9.55□□□□□ -0.88
PCP4P48539 ADGRE2-212ENST00000601345 3128 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
PCP4P48539 MFSD6-202ENST00000392328 4797 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
PCP4P48539 LHX6-203ENST00000373755 3384 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
PCP4P48539 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
PCP4P48539 FXN-202ENST00000396364 980 ntTSL 5 BASIC9.55□□□□□ -0.88
PCP4P48539 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC9.55□□□□□ -0.88
PCP4P48539 AC009065.1-201ENST00000564055 1225 ntBASIC9.55□□□□□ -0.88
PCP4P48539 AC026202.3-201ENST00000600805 1127 ntBASIC9.55□□□□□ -0.88
PCP4P48539 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
PCP4P48539 AL139011.1-202ENST00000642063 584 ntBASIC9.55□□□□□ -0.88
PCP4P48539 CYB5R4-202ENST00000369681 9252 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
PCP4P48539 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC9.55□□□□□ -0.88
PCP4P48539 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
PCP4P48539 WDR47-203ENST00000369962 4199 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
PCP4P48539 ORC1-201ENST00000371566 3080 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
PCP4P48539 FETUB-201ENST00000265029 1627 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
PCP4P48539 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
PCP4P48539 DDX5-202ENST00000450599 2077 ntTSL 2 BASIC9.55□□□□□ -0.88
PCP4P48539 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC9.55□□□□□ -0.88
PCP4P48539 REV3L-202ENST00000368802 10701 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
PCP4P48539 AP005264.8-201ENST00000623093 3313 ntBASIC9.55□□□□□ -0.88
PCP4P48539 INS-IGF2-205ENST00000641326 2861 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
PCP4P48539 DDX3P1-201ENST00000418231 1950 ntBASIC9.55□□□□□ -0.88
PCP4P48539 GDAP1-201ENST00000220822 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
PCP4P48539 LINC02068-201ENST00000418839 3212 ntTSL 2 BASIC9.55□□□□□ -0.88
PCP4P48539 MTMR3-203ENST00000351488 4464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
PCP4P48539 SARS-202ENST00000369923 1882 ntTSL 5 BASIC9.55□□□□□ -0.88
PCP4P48539 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC9.55□□□□□ -0.88
PCP4P48539 FYN-229ENST00000538466 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
PCP4P48539 CLN3-244ENST00000636147 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
PCP4P48539 ASAP3-209ENST00000495646 2552 ntTSL 2 BASIC9.55□□□□□ -0.88
PCP4P48539 AL662899.3-201ENST00000375880 2487 ntAPPRIS P1 TSL 3 BASIC9.55□□□□□ -0.88
PCP4P48539 PTGFR-202ENST00000370757 4379 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PCP4P48539 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC9.54□□□□□ -0.88
PCP4P48539 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
PCP4P48539 SCMH1-209ENST00000397174 2977 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
PCP4P48539 RPS6KA5-202ENST00000536315 2993 ntTSL 2 BASIC9.54□□□□□ -0.88
PCP4P48539 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
PCP4P48539 ZNF106-203ENST00000565380 5677 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
PCP4P48539 SEMA4D-213ENST00000455551 3594 ntTSL 5 BASIC9.54□□□□□ -0.88
PCP4P48539 AC105219.4-201ENST00000529743 1809 ntTSL 3 BASIC9.54□□□□□ -0.88
PCP4P48539 MAPK4-205ENST00000588540 3144 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
PCP4P48539 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
PCP4P48539 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PCP4P48539 ALDH1A2-204ENST00000537372 3700 ntTSL 2 BASIC9.54□□□□□ -0.88
PCP4P48539 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC9.54□□□□□ -0.88
PCP4P48539 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
PCP4P48539 UNC45A-216ENST00000639885 3255 ntTSL 5 BASIC9.54□□□□□ -0.88
PCP4P48539 GRM8-203ENST00000358373 3850 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PCP4P48539 UGT1A5-201ENST00000373414 2345 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PCP4P48539 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
PCP4P48539 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
PCP4P48539 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
PCP4P48539 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC9.54□□□□□ -0.88
PCP4P48539 HHAT-207ENST00000541565 3164 ntTSL 2 BASIC9.54□□□□□ -0.88
PCP4P48539 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PCP4P48539 INPP5B-203ENST00000373024 3060 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
PCP4P48539 MAPK10-274ENST00000641120 2456 ntBASIC9.54□□□□□ -0.88
PCP4P48539 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
PCP4P48539 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC9.54□□□□□ -0.88
PCP4P48539 AL024508.2-201ENST00000607749 1894 ntBASIC9.54□□□□□ -0.88
PCP4P48539 MON2-214ENST00000641654 10382 ntBASIC9.54□□□□□ -0.88
PCP4P48539 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
PCP4P48539 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC9.54□□□□□ -0.88
PCP4P48539 SLC38A3-206ENST00000614032 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PCP4P48539 SOX13-210ENST00000618875 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PCP4P48539 BRD1-203ENST00000404760 4550 ntTSL 2 BASIC9.54□□□□□ -0.88
PCP4P48539 FXR1-220ENST00000491062 1768 ntTSL 2 BASIC9.54□□□□□ -0.88
PCP4P48539 MR1-201ENST00000282990 2043 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
PCP4P48539 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC9.54□□□□□ -0.88
PCP4P48539 POTEJ-201ENST00000409602 3383 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
PCP4P48539 SLC9A3P2-201ENST00000447821 2021 ntBASIC9.54□□□□□ -0.88
PCP4P48539 CDH5-201ENST00000341529 4120 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PCP4P48539 TACC2-228ENST00000515273 9245 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms