Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AC100850.1-201ENST00000506768 649 ntBASIC14.82□□□□□ -0.04
CHRNA4P43681 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.82□□□□□ -0.04
CHRNA4P43681 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
CHRNA4P43681 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.82□□□□□ -0.04
CHRNA4P43681 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.82□□□□□ -0.04
CHRNA4P43681 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.82□□□□□ -0.04
CHRNA4P43681 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA4P43681 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CHRNA4P43681 SHC1P1-201ENST00000425230 1745 ntBASIC14.82□□□□□ -0.04
CHRNA4P43681 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CHRNA4P43681 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA4P43681 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CHRNA4P43681 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA4P43681 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CHRNA4P43681 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA4P43681 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA4P43681 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA4P43681 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CHRNA4P43681 AC136759.1-202ENST00000530858 2194 ntBASIC14.81□□□□□ -0.04
CHRNA4P43681 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.81□□□□□ -0.04
CHRNA4P43681 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA4P43681 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CHRNA4P43681 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA4P43681 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA4P43681 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA4P43681 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA4P43681 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CHRNA4P43681 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA4P43681 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.81□□□□□ -0.04
CHRNA4P43681 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA4P43681 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA4P43681 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA4P43681 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.81□□□□□ -0.04
CHRNA4P43681 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.81□□□□□ -0.04
CHRNA4P43681 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.81□□□□□ -0.04
CHRNA4P43681 AC010141.1-201ENST00000411585 623 ntBASIC14.81□□□□□ -0.04
CHRNA4P43681 KRT223P-202ENST00000449164 1292 ntBASIC14.81□□□□□ -0.04
CHRNA4P43681 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.81□□□□□ -0.04
CHRNA4P43681 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA4P43681 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.81□□□□□ -0.04
CHRNA4P43681 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.81□□□□□ -0.04
CHRNA4P43681 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.81□□□□□ -0.04
CHRNA4P43681 MIR4783-201ENST00000580343 82 ntBASIC14.81□□□□□ -0.04
CHRNA4P43681 AC017083.2-201ENST00000608069 979 ntBASIC14.81□□□□□ -0.04
CHRNA4P43681 AC133552.6-201ENST00000613406 534 ntBASIC14.81□□□□□ -0.04
CHRNA4P43681 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.81□□□□□ -0.04
CHRNA4P43681 COX11-210ENST00000639671 696 ntBASIC14.81□□□□□ -0.04
CHRNA4P43681 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA4P43681 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA4P43681 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA4P43681 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA4P43681 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.81□□□□□ -0.04
CHRNA4P43681 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.81□□□□□ -0.04
CHRNA4P43681 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA4P43681 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA4P43681 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA4P43681 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA4P43681 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CHRNA4P43681 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
CHRNA4P43681 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.81□□□□□ -0.04
CHRNA4P43681 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA4P43681 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CHRNA4P43681 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHRNA4P43681 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA4P43681 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA4P43681 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CHRNA4P43681 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA4P43681 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA4P43681 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA4P43681 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA4P43681 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
CHRNA4P43681 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CHRNA4P43681 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA4P43681 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA4P43681 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA4P43681 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA4P43681 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CHRNA4P43681 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRNA4P43681 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA4P43681 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.8□□□□□ -0.04
CHRNA4P43681 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRNA4P43681 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRNA4P43681 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.8□□□□□ -0.04
CHRNA4P43681 SORD2P-201ENST00000558556 1069 ntBASIC14.8□□□□□ -0.04
CHRNA4P43681 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.8□□□□□ -0.04
CHRNA4P43681 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRNA4P43681 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.8□□□□□ -0.04
CHRNA4P43681 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRNA4P43681 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CHRNA4P43681 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.8□□□□□ -0.04
CHRNA4P43681 AC239800.4-201ENST00000603712 296 ntBASIC14.8□□□□□ -0.04
CHRNA4P43681 AC027601.3-201ENST00000622907 509 ntBASIC14.8□□□□□ -0.04
CHRNA4P43681 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA4P43681 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRNA4P43681 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA4P43681 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
CHRNA4P43681 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNA4P43681 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CHRNA4P43681 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.8□□□□□ -0.04
CHRNA4P43681 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms