Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.81■□□□□ 0.12
TNFSF9P41273 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.81■□□□□ 0.12
TNFSF9P41273 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.81■□□□□ 0.12
TNFSF9P41273 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.81■□□□□ 0.12
TNFSF9P41273 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF9P41273 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.81■□□□□ 0.12
TNFSF9P41273 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.81■□□□□ 0.12
TNFSF9P41273 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.81■□□□□ 0.12
TNFSF9P41273 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.81■□□□□ 0.12
TNFSF9P41273 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.81■□□□□ 0.12
TNFSF9P41273 AC003686.1-201ENST00000550956 1034 ntBASIC15.81■□□□□ 0.12
TNFSF9P41273 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.81■□□□□ 0.12
TNFSF9P41273 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF9P41273 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.81■□□□□ 0.12
TNFSF9P41273 NDUFV2P1-201ENST00000596415 907 ntBASIC15.81■□□□□ 0.12
TNFSF9P41273 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.81■□□□□ 0.12
TNFSF9P41273 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TNFSF9P41273 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF9P41273 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.81■□□□□ 0.12
TNFSF9P41273 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF9P41273 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF9P41273 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.81■□□□□ 0.12
TNFSF9P41273 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.81■□□□□ 0.12
TNFSF9P41273 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF9P41273 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF9P41273 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF9P41273 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF9P41273 BX640514.1-201ENST00000583223 1918 ntBASIC15.8■□□□□ 0.12
TNFSF9P41273 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.8■□□□□ 0.12
TNFSF9P41273 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.8■□□□□ 0.12
TNFSF9P41273 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TNFSF9P41273 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF9P41273 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF9P41273 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.8■□□□□ 0.12
TNFSF9P41273 AC023908.3-201ENST00000564211 3047 ntBASIC15.8■□□□□ 0.12
TNFSF9P41273 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.8■□□□□ 0.12
TNFSF9P41273 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.8■□□□□ 0.12
TNFSF9P41273 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF9P41273 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TNFSF9P41273 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF9P41273 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF9P41273 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF9P41273 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF9P41273 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
TNFSF9P41273 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF9P41273 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TNFSF9P41273 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
TNFSF9P41273 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF9P41273 OR2R1P-201ENST00000441404 914 ntBASIC15.8■□□□□ 0.12
TNFSF9P41273 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF9P41273 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF9P41273 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
TNFSF9P41273 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF9P41273 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.8■□□□□ 0.12
TNFSF9P41273 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.8■□□□□ 0.12
TNFSF9P41273 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.8■□□□□ 0.12
TNFSF9P41273 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
TNFSF9P41273 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.8■□□□□ 0.12
TNFSF9P41273 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF9P41273 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF9P41273 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF9P41273 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.8■□□□□ 0.12
TNFSF9P41273 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF9P41273 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF9P41273 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
TNFSF9P41273 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF9P41273 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TNFSF9P41273 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF9P41273 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.8■□□□□ 0.12
TNFSF9P41273 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF9P41273 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF9P41273 FLJ16779-201ENST00000612722 7638 ntBASIC15.8■□□□□ 0.12
TNFSF9P41273 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TNFSF9P41273 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TNFSF9P41273 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TNFSF9P41273 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TNFSF9P41273 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.79■□□□□ 0.12
TNFSF9P41273 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.79■□□□□ 0.12
TNFSF9P41273 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.79■□□□□ 0.12
TNFSF9P41273 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.79■□□□□ 0.12
TNFSF9P41273 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TNFSF9P41273 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TNFSF9P41273 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TNFSF9P41273 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TNFSF9P41273 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.79■□□□□ 0.12
TNFSF9P41273 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TNFSF9P41273 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TNFSF9P41273 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TNFSF9P41273 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TNFSF9P41273 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TNFSF9P41273 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TNFSF9P41273 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TNFSF9P41273 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TNFSF9P41273 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TNFSF9P41273 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
TNFSF9P41273 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
TNFSF9P41273 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TNFSF9P41273 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
TNFSF9P41273 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TNFSF9P41273 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms