Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC18.31■□□□□ 0.52
COL15A1P39059 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC18.31■□□□□ 0.52
COL15A1P39059 AC084752.1-201ENST00000509766 622 ntBASIC18.31■□□□□ 0.52
COL15A1P39059 C2orf69P1-201ENST00000563532 1093 ntBASIC18.31■□□□□ 0.52
COL15A1P39059 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC18.31■□□□□ 0.52
COL15A1P39059 AC138466.4-201ENST00000623965 852 ntBASIC18.31■□□□□ 0.52
COL15A1P39059 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL15A1P39059 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
COL15A1P39059 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
COL15A1P39059 AC015688.4-201ENST00000580780 1647 ntBASIC18.31■□□□□ 0.52
COL15A1P39059 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC18.31■□□□□ 0.52
COL15A1P39059 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
COL15A1P39059 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL15A1P39059 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL15A1P39059 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
COL15A1P39059 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
COL15A1P39059 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL15A1P39059 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
COL15A1P39059 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
COL15A1P39059 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL15A1P39059 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC18.31■□□□□ 0.52
COL15A1P39059 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC18.3■□□□□ 0.52
COL15A1P39059 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL15A1P39059 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC18.3■□□□□ 0.52
COL15A1P39059 STK16-203ENST00000409516 895 ntTSL 2 BASIC18.3■□□□□ 0.52
COL15A1P39059 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC18.3■□□□□ 0.52
COL15A1P39059 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC18.3■□□□□ 0.52
COL15A1P39059 TPT1P11-201ENST00000458482 498 ntBASIC18.3■□□□□ 0.52
COL15A1P39059 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL15A1P39059 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC18.3■□□□□ 0.52
COL15A1P39059 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL15A1P39059 AL022344.2-201ENST00000568976 968 ntBASIC18.3■□□□□ 0.52
COL15A1P39059 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
COL15A1P39059 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL15A1P39059 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL15A1P39059 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL15A1P39059 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC18.3■□□□□ 0.52
COL15A1P39059 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL15A1P39059 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL15A1P39059 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL15A1P39059 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL15A1P39059 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC18.3■□□□□ 0.52
COL15A1P39059 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL15A1P39059 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
COL15A1P39059 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL15A1P39059 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL15A1P39059 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL15A1P39059 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL15A1P39059 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL15A1P39059 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL15A1P39059 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
COL15A1P39059 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
COL15A1P39059 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
COL15A1P39059 AC006372.4-201ENST00000624122 1543 ntBASIC18.3■□□□□ 0.52
COL15A1P39059 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
COL15A1P39059 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.3■□□□□ 0.52
COL15A1P39059 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
COL15A1P39059 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
COL15A1P39059 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC18.3■□□□□ 0.52
COL15A1P39059 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC18.3■□□□□ 0.52
COL15A1P39059 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL15A1P39059 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC18.3■□□□□ 0.52
COL15A1P39059 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC18.3■□□□□ 0.52
COL15A1P39059 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC18.3■□□□□ 0.52
COL15A1P39059 OR5BD1P-201ENST00000532527 817 ntBASIC18.3■□□□□ 0.52
COL15A1P39059 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC18.3■□□□□ 0.52
COL15A1P39059 AC140113.1-201ENST00000603467 169 ntBASIC18.3■□□□□ 0.52
COL15A1P39059 FO393412.1-201ENST00000619841 382 ntBASIC18.3■□□□□ 0.52
COL15A1P39059 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL15A1P39059 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL15A1P39059 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COL15A1P39059 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL15A1P39059 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL15A1P39059 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL15A1P39059 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.29■□□□□ 0.52
COL15A1P39059 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL15A1P39059 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL15A1P39059 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL15A1P39059 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
COL15A1P39059 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC18.29■□□□□ 0.52
COL15A1P39059 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
COL15A1P39059 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC18.29■□□□□ 0.52
COL15A1P39059 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC18.29■□□□□ 0.52
COL15A1P39059 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.29■□□□□ 0.52
COL15A1P39059 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.29■□□□□ 0.52
COL15A1P39059 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL15A1P39059 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL15A1P39059 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL15A1P39059 PYY2-201ENST00000315776 282 ntBASIC18.29■□□□□ 0.52
COL15A1P39059 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC18.29■□□□□ 0.52
COL15A1P39059 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.29■□□□□ 0.52
COL15A1P39059 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC18.29■□□□□ 0.52
COL15A1P39059 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL15A1P39059 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COL15A1P39059 BCAS2P2-201ENST00000425064 674 ntBASIC18.29■□□□□ 0.52
COL15A1P39059 PSMD4P1-201ENST00000433951 1109 ntBASIC18.29■□□□□ 0.52
COL15A1P39059 AL139008.1-201ENST00000437894 228 ntBASIC18.29■□□□□ 0.52
COL15A1P39059 RGS5-216ENST00000449680 788 ntTSL 3 BASIC18.29■□□□□ 0.52
COL15A1P39059 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC18.29■□□□□ 0.52
COL15A1P39059 RN7SL396P-201ENST00000471086 295 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms