Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COPB2P35606 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.73■□□□□ 0.27
COPB2P35606 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.73■□□□□ 0.27
COPB2P35606 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COPB2P35606 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COPB2P35606 BANF1P3-201ENST00000412556 261 ntBASIC16.73■□□□□ 0.27
COPB2P35606 HPGD-203ENST00000422112 805 ntTSL 2 BASIC16.73■□□□□ 0.27
COPB2P35606 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COPB2P35606 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.73■□□□□ 0.27
COPB2P35606 OR2R1P-201ENST00000441404 914 ntBASIC16.73■□□□□ 0.27
COPB2P35606 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.73■□□□□ 0.27
COPB2P35606 DUTP3-201ENST00000450025 415 ntBASIC16.73■□□□□ 0.27
COPB2P35606 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.73■□□□□ 0.27
COPB2P35606 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COPB2P35606 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.73■□□□□ 0.27
COPB2P35606 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.73■□□□□ 0.27
COPB2P35606 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
COPB2P35606 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
COPB2P35606 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.73■□□□□ 0.27
COPB2P35606 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
COPB2P35606 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.73■□□□□ 0.27
COPB2P35606 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.73■□□□□ 0.27
COPB2P35606 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COPB2P35606 CAP2P1-201ENST00000557743 1390 ntBASIC16.73■□□□□ 0.27
COPB2P35606 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.73■□□□□ 0.27
COPB2P35606 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COPB2P35606 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.73■□□□□ 0.27
COPB2P35606 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.73■□□□□ 0.27
COPB2P35606 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.73■□□□□ 0.27
COPB2P35606 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COPB2P35606 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.73■□□□□ 0.27
COPB2P35606 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.73■□□□□ 0.27
COPB2P35606 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COPB2P35606 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COPB2P35606 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COPB2P35606 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COPB2P35606 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COPB2P35606 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.72■□□□□ 0.27
COPB2P35606 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COPB2P35606 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COPB2P35606 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.72■□□□□ 0.27
COPB2P35606 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COPB2P35606 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COPB2P35606 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COPB2P35606 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COPB2P35606 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
COPB2P35606 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.72■□□□□ 0.27
COPB2P35606 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COPB2P35606 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
COPB2P35606 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
COPB2P35606 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COPB2P35606 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COPB2P35606 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COPB2P35606 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COPB2P35606 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.72■□□□□ 0.27
COPB2P35606 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.72■□□□□ 0.27
COPB2P35606 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.72■□□□□ 0.27
COPB2P35606 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COPB2P35606 RPSAP15-201ENST00000448168 861 ntBASIC16.72■□□□□ 0.27
COPB2P35606 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
COPB2P35606 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
COPB2P35606 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.72■□□□□ 0.27
COPB2P35606 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
COPB2P35606 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.72■□□□□ 0.27
COPB2P35606 NPM1P43-201ENST00000558669 786 ntBASIC16.72■□□□□ 0.27
COPB2P35606 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
COPB2P35606 AC005632.3-201ENST00000605544 308 ntBASIC16.72■□□□□ 0.27
COPB2P35606 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
COPB2P35606 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COPB2P35606 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COPB2P35606 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COPB2P35606 AC013726.1-201ENST00000563747 2285 ntBASIC16.72■□□□□ 0.27
COPB2P35606 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COPB2P35606 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COPB2P35606 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
COPB2P35606 AC015909.3-201ENST00000572855 1794 ntBASIC16.72■□□□□ 0.27
COPB2P35606 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.71■□□□□ 0.27
COPB2P35606 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
COPB2P35606 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COPB2P35606 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.71■□□□□ 0.27
COPB2P35606 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
COPB2P35606 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
COPB2P35606 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
COPB2P35606 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COPB2P35606 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
COPB2P35606 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COPB2P35606 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COPB2P35606 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COPB2P35606 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.71■□□□□ 0.27
COPB2P35606 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.71■□□□□ 0.27
COPB2P35606 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.71■□□□□ 0.27
COPB2P35606 RNA5SP359-201ENST00000364838 113 ntBASIC16.71■□□□□ 0.27
COPB2P35606 MIR557-201ENST00000385239 98 ntBASIC16.71■□□□□ 0.27
COPB2P35606 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
COPB2P35606 AL583805.1-201ENST00000391389 531 ntBASIC16.71■□□□□ 0.27
COPB2P35606 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16.71■□□□□ 0.27
COPB2P35606 RPSAP31-201ENST00000416648 895 ntBASIC16.71■□□□□ 0.27
COPB2P35606 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.71■□□□□ 0.27
COPB2P35606 AC078991.1-201ENST00000437297 610 ntBASIC16.71■□□□□ 0.27
COPB2P35606 RPL7P35-201ENST00000446943 740 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms