Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC16.12■□□□□ 0.17
CTGFP29279 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC16.12■□□□□ 0.17
CTGFP29279 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC16.12■□□□□ 0.17
CTGFP29279 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC16.12■□□□□ 0.17
CTGFP29279 AC126755.5-201ENST00000622756 267 ntBASIC16.12■□□□□ 0.17
CTGFP29279 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTGFP29279 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC16.12■□□□□ 0.17
CTGFP29279 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.12■□□□□ 0.17
CTGFP29279 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CTGFP29279 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CTGFP29279 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CTGFP29279 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CTGFP29279 AC008536.3-201ENST00000623282 1599 ntBASIC16.12■□□□□ 0.17
CTGFP29279 AC090340.1-201ENST00000620778 4980 ntBASIC16.12■□□□□ 0.17
CTGFP29279 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.12■□□□□ 0.17
CTGFP29279 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTGFP29279 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTGFP29279 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTGFP29279 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTGFP29279 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CTGFP29279 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTGFP29279 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CTGFP29279 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.11■□□□□ 0.17
CTGFP29279 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
CTGFP29279 AC117503.4-201ENST00000623229 1418 ntBASIC16.11■□□□□ 0.17
CTGFP29279 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CTGFP29279 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CTGFP29279 KRT8P43-201ENST00000406052 1458 ntBASIC16.11■□□□□ 0.17
CTGFP29279 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTGFP29279 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTGFP29279 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CTGFP29279 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTGFP29279 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTGFP29279 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CTGFP29279 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CTGFP29279 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CTGFP29279 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CTGFP29279 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CTGFP29279 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC16.11■□□□□ 0.17
CTGFP29279 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
CTGFP29279 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC16.11■□□□□ 0.17
CTGFP29279 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CTGFP29279 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTGFP29279 AC113347.2-201ENST00000512350 279 ntBASIC16.11■□□□□ 0.17
CTGFP29279 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC16.11■□□□□ 0.17
CTGFP29279 ANKRD26P1-203ENST00000569528 966 ntBASIC16.11■□□□□ 0.17
CTGFP29279 HNRNPA1P16-201ENST00000575692 955 ntBASIC16.11■□□□□ 0.17
CTGFP29279 FBXO36P1-201ENST00000579006 471 ntBASIC16.11■□□□□ 0.17
CTGFP29279 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC16.11■□□□□ 0.17
CTGFP29279 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC16.11■□□□□ 0.17
CTGFP29279 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CTGFP29279 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC16.11■□□□□ 0.17
CTGFP29279 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CTGFP29279 GGNBP1-204ENST00000613113 887 ntBASIC16.11■□□□□ 0.17
CTGFP29279 AC073869.4-201ENST00000620841 800 ntBASIC16.11■□□□□ 0.17
CTGFP29279 AC026336.4-201ENST00000624565 1050 ntBASIC16.11■□□□□ 0.17
CTGFP29279 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
CTGFP29279 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTGFP29279 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CTGFP29279 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTGFP29279 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
CTGFP29279 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTGFP29279 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.11■□□□□ 0.17
CTGFP29279 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTGFP29279 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.11■□□□□ 0.17
CTGFP29279 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CTGFP29279 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
CTGFP29279 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTGFP29279 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CTGFP29279 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CTGFP29279 AC091951.1-201ENST00000512854 2465 ntBASIC16.1■□□□□ 0.17
CTGFP29279 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTGFP29279 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTGFP29279 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CTGFP29279 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
CTGFP29279 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTGFP29279 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC16.1■□□□□ 0.17
CTGFP29279 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTGFP29279 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.1■□□□□ 0.17
CTGFP29279 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTGFP29279 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
CTGFP29279 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.1■□□□□ 0.17
CTGFP29279 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTGFP29279 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTGFP29279 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CTGFP29279 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CTGFP29279 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC16.1■□□□□ 0.17
CTGFP29279 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC16.1■□□□□ 0.17
CTGFP29279 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CTGFP29279 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC16.1■□□□□ 0.17
CTGFP29279 BCL2L12P1-201ENST00000508390 733 ntBASIC16.1■□□□□ 0.17
CTGFP29279 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC16.1■□□□□ 0.17
CTGFP29279 SORD2P-201ENST00000558556 1069 ntBASIC16.1■□□□□ 0.17
CTGFP29279 MED11-202ENST00000573708 802 ntTSL 2 BASIC16.1■□□□□ 0.17
CTGFP29279 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC16.1■□□□□ 0.17
CTGFP29279 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC16.1■□□□□ 0.17
CTGFP29279 AC110057.1-201ENST00000636031 898 ntBASIC16.1■□□□□ 0.17
CTGFP29279 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.1■□□□□ 0.17
CTGFP29279 AC138932.1-201ENST00000534164 6830 ntBASIC16.1■□□□□ 0.17
CTGFP29279 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms