Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
LAMA1P25391 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LAMA1P25391 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC13.96□□□□□ -0.18
LAMA1P25391 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC13.96□□□□□ -0.18
LAMA1P25391 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC13.96□□□□□ -0.18
LAMA1P25391 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC13.96□□□□□ -0.18
LAMA1P25391 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LAMA1P25391 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LAMA1P25391 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.95□□□□□ -0.18
LAMA1P25391 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LAMA1P25391 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.95□□□□□ -0.18
LAMA1P25391 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LAMA1P25391 LINC02228-204ENST00000642115 2962 ntBASIC13.95□□□□□ -0.18
LAMA1P25391 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.95□□□□□ -0.18
LAMA1P25391 PTGER4P2-201ENST00000328411 252 ntBASIC13.95□□□□□ -0.18
LAMA1P25391 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LAMA1P25391 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LAMA1P25391 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC13.95□□□□□ -0.18
LAMA1P25391 AL451000.1-201ENST00000451300 1186 ntBASIC13.95□□□□□ -0.18
LAMA1P25391 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LAMA1P25391 PTGER4P3-201ENST00000458150 252 ntBASIC13.95□□□□□ -0.18
LAMA1P25391 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC13.95□□□□□ -0.18
LAMA1P25391 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LAMA1P25391 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC13.95□□□□□ -0.18
LAMA1P25391 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LAMA1P25391 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LAMA1P25391 AC011498.7-201ENST00000624986 2027 ntBASIC13.95□□□□□ -0.18
LAMA1P25391 CICP14-201ENST00000629111 2732 ntBASIC13.95□□□□□ -0.18
LAMA1P25391 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LAMA1P25391 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.95□□□□□ -0.18
LAMA1P25391 AC009093.10-201ENST00000641956 1442 ntBASIC13.95□□□□□ -0.18
LAMA1P25391 CICP16-201ENST00000502609 2813 ntBASIC13.95□□□□□ -0.18
LAMA1P25391 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LAMA1P25391 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LAMA1P25391 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC13.95□□□□□ -0.18
LAMA1P25391 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.95□□□□□ -0.18
LAMA1P25391 STK24P1-201ENST00000455035 1291 ntBASIC13.95□□□□□ -0.18
LAMA1P25391 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LAMA1P25391 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LAMA1P25391 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LAMA1P25391 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LAMA1P25391 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LAMA1P25391 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC13.95□□□□□ -0.18
LAMA1P25391 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LAMA1P25391 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC13.94□□□□□ -0.18
LAMA1P25391 AC006486.2-201ENST00000624246 2199 ntBASIC13.94□□□□□ -0.18
LAMA1P25391 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LAMA1P25391 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LAMA1P25391 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC13.94□□□□□ -0.18
LAMA1P25391 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC13.94□□□□□ -0.18
LAMA1P25391 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LAMA1P25391 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LAMA1P25391 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC13.94□□□□□ -0.18
LAMA1P25391 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
LAMA1P25391 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LAMA1P25391 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LAMA1P25391 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LAMA1P25391 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LAMA1P25391 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LAMA1P25391 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LAMA1P25391 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LAMA1P25391 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LAMA1P25391 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LAMA1P25391 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.94□□□□□ -0.18
LAMA1P25391 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LAMA1P25391 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
LAMA1P25391 PGAM1P11-201ENST00000416729 680 ntBASIC13.94□□□□□ -0.18
LAMA1P25391 AC104961.1-201ENST00000427605 771 ntBASIC13.94□□□□□ -0.18
LAMA1P25391 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LAMA1P25391 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LAMA1P25391 AC023968.2-201ENST00000560593 1049 ntBASIC13.94□□□□□ -0.18
LAMA1P25391 GAS7-216ENST00000583882 553 ntTSL 5 BASIC13.94□□□□□ -0.18
LAMA1P25391 AL118522.1-201ENST00000611368 560 ntBASIC13.94□□□□□ -0.18
LAMA1P25391 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
LAMA1P25391 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LAMA1P25391 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LAMA1P25391 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LAMA1P25391 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.94□□□□□ -0.18
LAMA1P25391 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
LAMA1P25391 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.94□□□□□ -0.18
LAMA1P25391 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.94□□□□□ -0.18
LAMA1P25391 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LAMA1P25391 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
LAMA1P25391 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC13.94□□□□□ -0.18
LAMA1P25391 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC13.94□□□□□ -0.18
LAMA1P25391 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LAMA1P25391 SIGLEC22P-201ENST00000599104 714 ntBASIC13.94□□□□□ -0.18
LAMA1P25391 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC13.94□□□□□ -0.18
LAMA1P25391 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC13.94□□□□□ -0.18
LAMA1P25391 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LAMA1P25391 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LAMA1P25391 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LAMA1P25391 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LAMA1P25391 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LAMA1P25391 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.93□□□□□ -0.18
LAMA1P25391 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
LAMA1P25391 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.93□□□□□ -0.18
LAMA1P25391 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LAMA1P25391 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LAMA1P25391 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms