Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.64□□□□□ -0.39
TNFSF4P23510 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFSF4P23510 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFSF4P23510 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFSF4P23510 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFSF4P23510 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.64□□□□□ -0.39
TNFSF4P23510 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC12.64□□□□□ -0.39
TNFSF4P23510 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC12.64□□□□□ -0.39
TNFSF4P23510 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFSF4P23510 ALG3P1-201ENST00000508806 1114 ntBASIC12.64□□□□□ -0.39
TNFSF4P23510 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.64□□□□□ -0.39
TNFSF4P23510 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.64□□□□□ -0.39
TNFSF4P23510 MIR4741-201ENST00000579822 90 ntBASIC12.64□□□□□ -0.39
TNFSF4P23510 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.64□□□□□ -0.39
TNFSF4P23510 MIR4259-201ENST00000584466 101 ntBASIC12.64□□□□□ -0.39
TNFSF4P23510 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TNFSF4P23510 AC008825.2-201ENST00000603374 718 ntBASIC12.64□□□□□ -0.39
TNFSF4P23510 AL136301.1-201ENST00000615830 422 ntBASIC12.64□□□□□ -0.39
TNFSF4P23510 SNX18-202ENST00000343017 3140 ntBASIC12.64□□□□□ -0.39
TNFSF4P23510 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.64□□□□□ -0.39
TNFSF4P23510 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.64□□□□□ -0.39
TNFSF4P23510 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFSF4P23510 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.64□□□□□ -0.39
TNFSF4P23510 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TNFSF4P23510 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFSF4P23510 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.64□□□□□ -0.39
TNFSF4P23510 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFSF4P23510 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFSF4P23510 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
TNFSF4P23510 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFSF4P23510 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
TNFSF4P23510 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TNFSF4P23510 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.64□□□□□ -0.39
TNFSF4P23510 FGD5P1-202ENST00000614866 2498 ntBASIC12.64□□□□□ -0.39
TNFSF4P23510 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TNFSF4P23510 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFSF4P23510 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.63□□□□□ -0.39
TNFSF4P23510 TUBB1P2-201ENST00000422712 1306 ntBASIC12.63□□□□□ -0.39
TNFSF4P23510 TUBB1P1-201ENST00000503144 1300 ntBASIC12.63□□□□□ -0.39
TNFSF4P23510 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.63□□□□□ -0.39
TNFSF4P23510 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.63□□□□□ -0.39
TNFSF4P23510 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.63□□□□□ -0.39
TNFSF4P23510 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 OR2I1P-208ENST00000641137 4948 ntBASIC12.63□□□□□ -0.39
TNFSF4P23510 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
TNFSF4P23510 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.63□□□□□ -0.39
TNFSF4P23510 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.63□□□□□ -0.39
TNFSF4P23510 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.63□□□□□ -0.39
TNFSF4P23510 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
TNFSF4P23510 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.63□□□□□ -0.39
TNFSF4P23510 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.63□□□□□ -0.39
TNFSF4P23510 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 RN7SKP230-201ENST00000365642 335 ntBASIC12.63□□□□□ -0.39
TNFSF4P23510 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.63□□□□□ -0.39
TNFSF4P23510 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
TNFSF4P23510 BTBD6P1-201ENST00000412176 1267 ntBASIC12.63□□□□□ -0.39
TNFSF4P23510 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
TNFSF4P23510 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.63□□□□□ -0.39
TNFSF4P23510 MTX1P1-201ENST00000440904 838 ntBASIC12.63□□□□□ -0.39
TNFSF4P23510 AL035414.1-201ENST00000451327 857 ntBASIC12.63□□□□□ -0.39
TNFSF4P23510 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 GCOM2-201ENST00000509133 1104 ntBASIC12.63□□□□□ -0.39
TNFSF4P23510 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.63□□□□□ -0.39
TNFSF4P23510 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC12.63□□□□□ -0.39
TNFSF4P23510 AC131206.1-201ENST00000538078 1211 ntBASIC12.63□□□□□ -0.39
TNFSF4P23510 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.63□□□□□ -0.39
TNFSF4P23510 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.63□□□□□ -0.39
TNFSF4P23510 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
TNFSF4P23510 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
TNFSF4P23510 AC020910.5-201ENST00000623668 1865 ntBASIC12.63□□□□□ -0.39
TNFSF4P23510 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
TNFSF4P23510 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.63□□□□□ -0.39
TNFSF4P23510 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
TNFSF4P23510 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TNFSF4P23510 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms