Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BCKDHBP21953 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.37□□□□□ -0.11
BCKDHBP21953 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.37□□□□□ -0.11
BCKDHBP21953 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BCKDHBP21953 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
BCKDHBP21953 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BCKDHBP21953 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BCKDHBP21953 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
BCKDHBP21953 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BCKDHBP21953 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BCKDHBP21953 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.37□□□□□ -0.11
BCKDHBP21953 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.37□□□□□ -0.11
BCKDHBP21953 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BCKDHBP21953 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
BCKDHBP21953 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BCKDHBP21953 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
BCKDHBP21953 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.37□□□□□ -0.11
BCKDHBP21953 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
BCKDHBP21953 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
BCKDHBP21953 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.37□□□□□ -0.11
BCKDHBP21953 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BCKDHBP21953 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.37□□□□□ -0.11
BCKDHBP21953 AC092580.1-201ENST00000433998 658 ntBASIC14.37□□□□□ -0.11
BCKDHBP21953 AREG-202ENST00000502307 956 ntTSL 5 BASIC14.37□□□□□ -0.11
BCKDHBP21953 AC093909.3-201ENST00000504783 336 ntBASIC14.37□□□□□ -0.11
BCKDHBP21953 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BCKDHBP21953 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BCKDHBP21953 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.37□□□□□ -0.11
BCKDHBP21953 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC14.37□□□□□ -0.11
BCKDHBP21953 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.37□□□□□ -0.11
BCKDHBP21953 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BCKDHBP21953 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BCKDHBP21953 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BCKDHBP21953 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BCKDHBP21953 TMBIM7P-203ENST00000641617 1718 ntBASIC14.37□□□□□ -0.11
BCKDHBP21953 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BCKDHBP21953 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BCKDHBP21953 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
BCKDHBP21953 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC14.37□□□□□ -0.11
BCKDHBP21953 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
BCKDHBP21953 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BCKDHBP21953 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
BCKDHBP21953 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BCKDHBP21953 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.36□□□□□ -0.11
BCKDHBP21953 LINC00554-201ENST00000564841 3011 ntBASIC14.36□□□□□ -0.11
BCKDHBP21953 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.36□□□□□ -0.11
BCKDHBP21953 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BCKDHBP21953 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BCKDHBP21953 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
BCKDHBP21953 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BCKDHBP21953 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
BCKDHBP21953 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.36□□□□□ -0.11
BCKDHBP21953 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.36□□□□□ -0.11
BCKDHBP21953 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.36□□□□□ -0.11
BCKDHBP21953 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
BCKDHBP21953 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BCKDHBP21953 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BCKDHBP21953 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BCKDHBP21953 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BCKDHBP21953 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.36□□□□□ -0.11
BCKDHBP21953 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
BCKDHBP21953 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BCKDHBP21953 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC14.36□□□□□ -0.11
BCKDHBP21953 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC14.36□□□□□ -0.11
BCKDHBP21953 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC14.36□□□□□ -0.11
BCKDHBP21953 AC024293.1-201ENST00000467930 498 ntBASIC14.36□□□□□ -0.11
BCKDHBP21953 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC14.36□□□□□ -0.11
BCKDHBP21953 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.36□□□□□ -0.11
BCKDHBP21953 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
BCKDHBP21953 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
BCKDHBP21953 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.36□□□□□ -0.11
BCKDHBP21953 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.36□□□□□ -0.11
BCKDHBP21953 MIR4472-1-201ENST00000584349 80 ntBASIC14.36□□□□□ -0.11
BCKDHBP21953 MIR2392-201ENST00000584881 84 ntBASIC14.36□□□□□ -0.11
BCKDHBP21953 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
BCKDHBP21953 AC011247.3-201ENST00000603297 438 ntBASIC14.36□□□□□ -0.11
BCKDHBP21953 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BCKDHBP21953 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
BCKDHBP21953 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BCKDHBP21953 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
BCKDHBP21953 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BCKDHBP21953 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BCKDHBP21953 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
BCKDHBP21953 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
BCKDHBP21953 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BCKDHBP21953 AC006372.4-201ENST00000624122 1543 ntBASIC14.36□□□□□ -0.11
BCKDHBP21953 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BCKDHBP21953 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BCKDHBP21953 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.35□□□□□ -0.11
BCKDHBP21953 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.35□□□□□ -0.11
BCKDHBP21953 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.35□□□□□ -0.11
BCKDHBP21953 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
BCKDHBP21953 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.35□□□□□ -0.11
BCKDHBP21953 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BCKDHBP21953 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.35□□□□□ -0.11
BCKDHBP21953 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BCKDHBP21953 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
BCKDHBP21953 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
BCKDHBP21953 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BCKDHBP21953 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms