Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 AP000812.2-201ENST00000538934 718 ntBASIC13.2□□□□□ -0.3
HLA-DOBP13765 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 RN7SL713P-201ENST00000582127 302 ntBASIC13.2□□□□□ -0.3
HLA-DOBP13765 AL512343.1-201ENST00000605837 169 ntBASIC13.2□□□□□ -0.3
HLA-DOBP13765 AL035252.4-201ENST00000624174 288 ntBASIC13.2□□□□□ -0.3
HLA-DOBP13765 AC002472.3-201ENST00000640124 621 ntBASIC13.2□□□□□ -0.3
HLA-DOBP13765 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 KRT8P4-201ENST00000509735 1454 ntBASIC13.2□□□□□ -0.3
HLA-DOBP13765 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HLA-DOBP13765 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HLA-DOBP13765 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HLA-DOBP13765 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 AL928921.2-201ENST00000641325 2442 ntBASIC13.2□□□□□ -0.3
HLA-DOBP13765 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HLA-DOBP13765 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HLA-DOBP13765 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 RN7SL832P-201ENST00000607781 1756 ntBASIC13.2□□□□□ -0.3
HLA-DOBP13765 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HLA-DOBP13765 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.2□□□□□ -0.3
HLA-DOBP13765 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HLA-DOBP13765 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HLA-DOBP13765 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HLA-DOBP13765 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HLA-DOBP13765 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HLA-DOBP13765 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
HLA-DOBP13765 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HLA-DOBP13765 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HLA-DOBP13765 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HLA-DOBP13765 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HLA-DOBP13765 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HLA-DOBP13765 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HLA-DOBP13765 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
HLA-DOBP13765 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.19□□□□□ -0.3
HLA-DOBP13765 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
HLA-DOBP13765 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HLA-DOBP13765 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.19□□□□□ -0.3
HLA-DOBP13765 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
HLA-DOBP13765 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HLA-DOBP13765 AC079776.1-201ENST00000401540 1152 ntBASIC13.19□□□□□ -0.3
HLA-DOBP13765 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.19□□□□□ -0.3
HLA-DOBP13765 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.19□□□□□ -0.3
HLA-DOBP13765 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HLA-DOBP13765 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.19□□□□□ -0.3
HLA-DOBP13765 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.19□□□□□ -0.3
HLA-DOBP13765 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.19□□□□□ -0.3
HLA-DOBP13765 ALG3P1-201ENST00000508806 1114 ntBASIC13.19□□□□□ -0.3
HLA-DOBP13765 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
HLA-DOBP13765 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.19□□□□□ -0.3
HLA-DOBP13765 RHOXF1P1-202ENST00000635473 501 ntBASIC13.19□□□□□ -0.3
HLA-DOBP13765 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
HLA-DOBP13765 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HLA-DOBP13765 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HLA-DOBP13765 KHSRPP1-201ENST00000427983 1768 ntBASIC13.19□□□□□ -0.3
HLA-DOBP13765 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HLA-DOBP13765 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HLA-DOBP13765 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HLA-DOBP13765 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.19□□□□□ -0.3
HLA-DOBP13765 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HLA-DOBP13765 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HLA-DOBP13765 AL590440.2-201ENST00000641973 1595 ntBASIC13.19□□□□□ -0.3
HLA-DOBP13765 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HLA-DOBP13765 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
HLA-DOBP13765 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HLA-DOBP13765 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 AHCYP2-201ENST00000430630 1300 ntBASIC13.18□□□□□ -0.3
HLA-DOBP13765 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
HLA-DOBP13765 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
HLA-DOBP13765 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms