Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
LAMP1P11279 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.94□□□□□ -0.18
LAMP1P11279 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
LAMP1P11279 ECM1P1-201ENST00000604092 1279 ntBASIC13.94□□□□□ -0.18
LAMP1P11279 AC132938.4-201ENST00000623835 848 ntBASIC13.94□□□□□ -0.18
LAMP1P11279 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
LAMP1P11279 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LAMP1P11279 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LAMP1P11279 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LAMP1P11279 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LAMP1P11279 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LAMP1P11279 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LAMP1P11279 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
LAMP1P11279 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LAMP1P11279 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LAMP1P11279 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LAMP1P11279 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.94□□□□□ -0.18
LAMP1P11279 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LAMP1P11279 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LAMP1P11279 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.93□□□□□ -0.18
LAMP1P11279 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.93□□□□□ -0.18
LAMP1P11279 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.93□□□□□ -0.18
LAMP1P11279 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LAMP1P11279 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
LAMP1P11279 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LAMP1P11279 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
LAMP1P11279 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LAMP1P11279 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.93□□□□□ -0.18
LAMP1P11279 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.93□□□□□ -0.18
LAMP1P11279 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.93□□□□□ -0.18
LAMP1P11279 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.93□□□□□ -0.18
LAMP1P11279 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.93□□□□□ -0.18
LAMP1P11279 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LAMP1P11279 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.93□□□□□ -0.18
LAMP1P11279 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.93□□□□□ -0.18
LAMP1P11279 AC025279.2-201ENST00000569730 653 ntBASIC13.93□□□□□ -0.18
LAMP1P11279 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.93□□□□□ -0.18
LAMP1P11279 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.93□□□□□ -0.18
LAMP1P11279 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
LAMP1P11279 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.93□□□□□ -0.18
LAMP1P11279 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LAMP1P11279 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LAMP1P11279 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
LAMP1P11279 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LAMP1P11279 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.93□□□□□ -0.18
LAMP1P11279 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.93□□□□□ -0.18
LAMP1P11279 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LAMP1P11279 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LAMP1P11279 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LAMP1P11279 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
LAMP1P11279 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.92□□□□□ -0.18
LAMP1P11279 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LAMP1P11279 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LAMP1P11279 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LAMP1P11279 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LAMP1P11279 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LAMP1P11279 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LAMP1P11279 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LAMP1P11279 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LAMP1P11279 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LAMP1P11279 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
LAMP1P11279 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LAMP1P11279 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LAMP1P11279 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LAMP1P11279 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LAMP1P11279 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
LAMP1P11279 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms