Protein–RNA interactions for Protein: P11047

LAMC1, Laminin subunit gamma-1, humanhuman

Predictions only

Length 1,609 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC1P11047 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LAMC1P11047 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC20.22■□□□□ 0.83
LAMC1P11047 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LAMC1P11047 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC20.21■□□□□ 0.83
LAMC1P11047 USP39-220ENST00000613444 2161 ntTSL 2 BASIC20.21■□□□□ 0.83
LAMC1P11047 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LAMC1P11047 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LAMC1P11047 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
LAMC1P11047 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LAMC1P11047 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LAMC1P11047 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LAMC1P11047 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LAMC1P11047 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LAMC1P11047 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC20.21■□□□□ 0.83
LAMC1P11047 AC095040.1-201ENST00000513286 675 ntBASIC20.21■□□□□ 0.83
LAMC1P11047 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LAMC1P11047 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
LAMC1P11047 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LAMC1P11047 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LAMC1P11047 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LAMC1P11047 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LAMC1P11047 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LAMC1P11047 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC20.2■□□□□ 0.82
LAMC1P11047 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LAMC1P11047 AC006372.4-201ENST00000624122 1543 ntBASIC20.2■□□□□ 0.82
LAMC1P11047 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC20.2■□□□□ 0.82
LAMC1P11047 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
LAMC1P11047 BAK1P1-201ENST00000317045 636 ntBASIC20.2■□□□□ 0.82
LAMC1P11047 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC20.2■□□□□ 0.82
LAMC1P11047 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LAMC1P11047 BX679664.3-201ENST00000414070 555 ntBASIC20.2■□□□□ 0.82
LAMC1P11047 ACTBP7-201ENST00000418351 1124 ntBASIC20.2■□□□□ 0.82
LAMC1P11047 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC20.2■□□□□ 0.82
LAMC1P11047 AC113935.1-201ENST00000471722 555 ntBASIC20.2■□□□□ 0.82
LAMC1P11047 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC20.2■□□□□ 0.82
LAMC1P11047 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC20.2■□□□□ 0.82
LAMC1P11047 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC20.2■□□□□ 0.82
LAMC1P11047 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LAMC1P11047 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LAMC1P11047 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LAMC1P11047 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC20.2■□□□□ 0.82
LAMC1P11047 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LAMC1P11047 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
LAMC1P11047 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
LAMC1P11047 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
LAMC1P11047 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LAMC1P11047 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC20.2■□□□□ 0.82
LAMC1P11047 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
LAMC1P11047 AC007191.1-201ENST00000623179 2995 ntBASIC20.2■□□□□ 0.82
LAMC1P11047 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LAMC1P11047 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LAMC1P11047 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LAMC1P11047 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC20.2■□□□□ 0.82
LAMC1P11047 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC20.2■□□□□ 0.82
LAMC1P11047 AC006987.1-201ENST00000413610 527 ntBASIC20.2■□□□□ 0.82
LAMC1P11047 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC20.2■□□□□ 0.82
LAMC1P11047 DDX39AP1-201ENST00000445147 1181 ntBASIC20.2■□□□□ 0.82
LAMC1P11047 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
LAMC1P11047 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
LAMC1P11047 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC20.2■□□□□ 0.82
LAMC1P11047 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC20.19■□□□□ 0.82
LAMC1P11047 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LAMC1P11047 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LAMC1P11047 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LAMC1P11047 AC019109.1-201ENST00000401725 1874 ntBASIC20.19■□□□□ 0.82
LAMC1P11047 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC20.19■□□□□ 0.82
LAMC1P11047 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LAMC1P11047 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LAMC1P11047 AC012617.1-204ENST00000586340 2305 ntBASIC20.19■□□□□ 0.82
LAMC1P11047 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LAMC1P11047 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
LAMC1P11047 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LAMC1P11047 HSPA8P5-201ENST00000456928 2069 ntBASIC20.19■□□□□ 0.82
LAMC1P11047 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LAMC1P11047 KRT8P43-201ENST00000406052 1458 ntBASIC20.19■□□□□ 0.82
LAMC1P11047 AL022313.4-201ENST00000562756 2046 ntBASIC20.19■□□□□ 0.82
LAMC1P11047 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LAMC1P11047 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
LAMC1P11047 AC005912.2-201ENST00000619492 2400 ntBASIC20.19■□□□□ 0.82
LAMC1P11047 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LAMC1P11047 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC20.19■□□□□ 0.82
LAMC1P11047 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LAMC1P11047 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LAMC1P11047 EEF1DP2-201ENST00000433698 843 ntBASIC20.19■□□□□ 0.82
LAMC1P11047 AC018638.5-201ENST00000450885 754 ntBASIC20.19■□□□□ 0.82
LAMC1P11047 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC20.19■□□□□ 0.82
LAMC1P11047 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
LAMC1P11047 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC20.19■□□□□ 0.82
LAMC1P11047 AC068867.1-201ENST00000559855 150 ntBASIC20.19■□□□□ 0.82
LAMC1P11047 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LAMC1P11047 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LAMC1P11047 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
LAMC1P11047 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LAMC1P11047 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LAMC1P11047 AC016397.2-201ENST00000624848 1985 ntBASIC20.19■□□□□ 0.82
LAMC1P11047 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC20.18■□□□□ 0.82
LAMC1P11047 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC20.18■□□□□ 0.82
LAMC1P11047 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LAMC1P11047 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LAMC1P11047 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms