Protein–RNA interactions for Protein: P0DN86

CGB3, Choriogonadotropin subunit beta 3, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3P0DN86 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
CGB3P0DN86 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CGB3P0DN86 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
CGB3P0DN86 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.02□□□□□ -0.49
CGB3P0DN86 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.02□□□□□ -0.49
CGB3P0DN86 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CGB3P0DN86 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.02□□□□□ -0.49
CGB3P0DN86 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
CGB3P0DN86 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.02□□□□□ -0.49
CGB3P0DN86 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
CGB3P0DN86 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.49
CGB3P0DN86 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.01□□□□□ -0.49
CGB3P0DN86 REXO1L6P-201ENST00000603433 1515 ntBASIC12.01□□□□□ -0.49
CGB3P0DN86 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.01□□□□□ -0.49
CGB3P0DN86 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.01□□□□□ -0.49
CGB3P0DN86 AC041040.2-201ENST00000622926 2899 ntBASIC12.01□□□□□ -0.49
CGB3P0DN86 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 AC090643.2-201ENST00000623442 2029 ntBASIC12.01□□□□□ -0.49
CGB3P0DN86 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 AC011474.4-201ENST00000623523 2076 ntBASIC12.01□□□□□ -0.49
CGB3P0DN86 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CGB3P0DN86 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
CGB3P0DN86 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
CGB3P0DN86 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CGB3P0DN86 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CGB3P0DN86 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 MST1P2-201ENST00000457982 2291 ntBASIC12.01□□□□□ -0.49
CGB3P0DN86 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CGB3P0DN86 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CGB3P0DN86 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.01□□□□□ -0.49
CGB3P0DN86 AL354877.1-201ENST00000424412 413 ntBASIC12.01□□□□□ -0.49
CGB3P0DN86 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.01□□□□□ -0.49
CGB3P0DN86 KLF2P1-201ENST00000447438 1042 ntBASIC12.01□□□□□ -0.49
CGB3P0DN86 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC12.01□□□□□ -0.49
CGB3P0DN86 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.01□□□□□ -0.49
CGB3P0DN86 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.01□□□□□ -0.49
CGB3P0DN86 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC12.01□□□□□ -0.49
CGB3P0DN86 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.01□□□□□ -0.49
CGB3P0DN86 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 Z98259.2-201ENST00000641583 609 ntBASIC12.01□□□□□ -0.49
CGB3P0DN86 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CGB3P0DN86 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CGB3P0DN86 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.01□□□□□ -0.49
CGB3P0DN86 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CGB3P0DN86 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CGB3P0DN86 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.01□□□□□ -0.49
CGB3P0DN86 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
CGB3P0DN86 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CGB3P0DN86 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.01□□□□□ -0.49
CGB3P0DN86 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CGB3P0DN86 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12□□□□□ -0.49
CGB3P0DN86 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12□□□□□ -0.49
CGB3P0DN86 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12□□□□□ -0.49
CGB3P0DN86 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CGB3P0DN86 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12□□□□□ -0.49
CGB3P0DN86 AL359881.3-201ENST00000602640 1721 ntBASIC12□□□□□ -0.49
CGB3P0DN86 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12□□□□□ -0.49
CGB3P0DN86 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12□□□□□ -0.49
CGB3P0DN86 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CGB3P0DN86 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
CGB3P0DN86 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12□□□□□ -0.49
CGB3P0DN86 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CGB3P0DN86 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
CGB3P0DN86 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12□□□□□ -0.49
CGB3P0DN86 BEND3P1-201ENST00000421591 1944 ntBASIC12□□□□□ -0.49
CGB3P0DN86 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
CGB3P0DN86 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CGB3P0DN86 AL022313.4-201ENST00000562756 2046 ntBASIC12□□□□□ -0.49
CGB3P0DN86 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CGB3P0DN86 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12□□□□□ -0.49
CGB3P0DN86 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12□□□□□ -0.49
CGB3P0DN86 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
CGB3P0DN86 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12□□□□□ -0.49
CGB3P0DN86 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms