Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.32□□□□□ -0.28
FREM3P0C091 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
FREM3P0C091 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.32□□□□□ -0.28
FREM3P0C091 MIR3619-201ENST00000579667 83 ntBASIC13.32□□□□□ -0.28
FREM3P0C091 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
FREM3P0C091 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FREM3P0C091 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
FREM3P0C091 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
FREM3P0C091 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
FREM3P0C091 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FREM3P0C091 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
FREM3P0C091 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
FREM3P0C091 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FREM3P0C091 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
FREM3P0C091 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FREM3P0C091 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
FREM3P0C091 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FREM3P0C091 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FREM3P0C091 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.31□□□□□ -0.28
FREM3P0C091 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
FREM3P0C091 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.31□□□□□ -0.28
FREM3P0C091 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.31□□□□□ -0.28
FREM3P0C091 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.31□□□□□ -0.28
FREM3P0C091 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.31□□□□□ -0.28
FREM3P0C091 AC009779.1-201ENST00000551138 283 ntBASIC13.31□□□□□ -0.28
FREM3P0C091 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.31□□□□□ -0.28
FREM3P0C091 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.31□□□□□ -0.28
FREM3P0C091 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.31□□□□□ -0.28
FREM3P0C091 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
FREM3P0C091 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
FREM3P0C091 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FREM3P0C091 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FREM3P0C091 AL161772.1-201ENST00000610494 4412 ntBASIC13.31□□□□□ -0.28
FREM3P0C091 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FREM3P0C091 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FREM3P0C091 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FREM3P0C091 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.31□□□□□ -0.28
FREM3P0C091 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.31□□□□□ -0.28
FREM3P0C091 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
FREM3P0C091 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.31□□□□□ -0.28
FREM3P0C091 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.31□□□□□ -0.28
FREM3P0C091 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.31□□□□□ -0.28
FREM3P0C091 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FREM3P0C091 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FREM3P0C091 CYP4F23P-201ENST00000593402 1579 ntBASIC13.31□□□□□ -0.28
FREM3P0C091 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
FREM3P0C091 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
FREM3P0C091 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
FREM3P0C091 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FREM3P0C091 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FREM3P0C091 DPM3-202ENST00000368399 517 ntBASIC13.31□□□□□ -0.28
FREM3P0C091 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FREM3P0C091 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC13.31□□□□□ -0.28
FREM3P0C091 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FREM3P0C091 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.31□□□□□ -0.28
FREM3P0C091 AF254983.2-201ENST00000612331 135 ntBASIC13.31□□□□□ -0.28
FREM3P0C091 AC027601.3-201ENST00000622907 509 ntBASIC13.31□□□□□ -0.28
FREM3P0C091 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FREM3P0C091 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
FREM3P0C091 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FREM3P0C091 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.31□□□□□ -0.28
FREM3P0C091 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.31□□□□□ -0.28
FREM3P0C091 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FREM3P0C091 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FREM3P0C091 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
FREM3P0C091 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FREM3P0C091 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.31□□□□□ -0.28
FREM3P0C091 AL354702.1-201ENST00000442006 1960 ntBASIC13.31□□□□□ -0.28
FREM3P0C091 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.31□□□□□ -0.28
FREM3P0C091 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.31□□□□□ -0.28
FREM3P0C091 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 AC018629.1-201ENST00000623381 1736 ntBASIC13.3□□□□□ -0.28
FREM3P0C091 AC067930.6-201ENST00000623257 4947 ntBASIC13.3□□□□□ -0.28
FREM3P0C091 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
FREM3P0C091 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 AL133338.1-201ENST00000565695 1517 ntBASIC13.3□□□□□ -0.28
FREM3P0C091 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
FREM3P0C091 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
FREM3P0C091 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.3□□□□□ -0.28
FREM3P0C091 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
FREM3P0C091 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.3□□□□□ -0.28
FREM3P0C091 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.3□□□□□ -0.28
FREM3P0C091 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.3□□□□□ -0.28
FREM3P0C091 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.3□□□□□ -0.28
FREM3P0C091 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FREM3P0C091 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms