Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16■□□□□ 0.15
VTNP04004 RN7SL258P-201ENST00000478664 300 ntBASIC16■□□□□ 0.15
VTNP04004 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16■□□□□ 0.15
VTNP04004 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16■□□□□ 0.15
VTNP04004 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16■□□□□ 0.15
VTNP04004 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16■□□□□ 0.15
VTNP04004 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16■□□□□ 0.15
VTNP04004 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VTNP04004 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VTNP04004 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VTNP04004 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16■□□□□ 0.15
VTNP04004 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VTNP04004 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16■□□□□ 0.15
VTNP04004 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
VTNP04004 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16■□□□□ 0.15
VTNP04004 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16■□□□□ 0.15
VTNP04004 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
VTNP04004 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
VTNP04004 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16■□□□□ 0.15
VTNP04004 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
VTNP04004 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VTNP04004 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VTNP04004 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VTNP04004 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.99■□□□□ 0.15
VTNP04004 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VTNP04004 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
VTNP04004 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.99■□□□□ 0.15
VTNP04004 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VTNP04004 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
VTNP04004 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
VTNP04004 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VTNP04004 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
VTNP04004 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.99■□□□□ 0.15
VTNP04004 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.99■□□□□ 0.15
VTNP04004 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC15.99■□□□□ 0.15
VTNP04004 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
VTNP04004 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.99■□□□□ 0.15
VTNP04004 FGFR3P1-201ENST00000449999 601 ntBASIC15.99■□□□□ 0.15
VTNP04004 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.99■□□□□ 0.15
VTNP04004 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC15.99■□□□□ 0.15
VTNP04004 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VTNP04004 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
VTNP04004 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC15.99■□□□□ 0.15
VTNP04004 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.99■□□□□ 0.15
VTNP04004 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.99■□□□□ 0.15
VTNP04004 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.99■□□□□ 0.15
VTNP04004 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.99■□□□□ 0.15
VTNP04004 LINC01783-202ENST00000614408 828 ntBASIC15.99■□□□□ 0.15
VTNP04004 BX284668.2-205ENST00000619677 828 ntBASIC15.99■□□□□ 0.15
VTNP04004 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VTNP04004 PCDHA3-202ENST00000532566 4594 ntBASIC15.99■□□□□ 0.15
VTNP04004 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VTNP04004 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.99■□□□□ 0.15
VTNP04004 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.99■□□□□ 0.15
VTNP04004 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VTNP04004 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
VTNP04004 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VTNP04004 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.99■□□□□ 0.15
VTNP04004 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VTNP04004 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.99■□□□□ 0.15
VTNP04004 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VTNP04004 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VTNP04004 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.99■□□□□ 0.15
VTNP04004 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
VTNP04004 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
VTNP04004 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.99■□□□□ 0.15
VTNP04004 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VTNP04004 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
VTNP04004 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.98■□□□□ 0.15
VTNP04004 AC006480.2-201ENST00000609770 1337 ntBASIC15.98■□□□□ 0.15
VTNP04004 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
VTNP04004 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.98■□□□□ 0.15
VTNP04004 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.98■□□□□ 0.15
VTNP04004 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VTNP04004 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
VTNP04004 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.98■□□□□ 0.15
VTNP04004 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VTNP04004 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VTNP04004 FXNP2-201ENST00000411625 547 ntBASIC15.98■□□□□ 0.15
VTNP04004 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.98■□□□□ 0.15
VTNP04004 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC15.98■□□□□ 0.15
VTNP04004 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.98■□□□□ 0.15
VTNP04004 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.98■□□□□ 0.15
VTNP04004 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.98■□□□□ 0.15
VTNP04004 AC019193.1-201ENST00000506678 823 ntBASIC15.98■□□□□ 0.15
VTNP04004 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
VTNP04004 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VTNP04004 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.98■□□□□ 0.15
VTNP04004 PHBP15-201ENST00000574228 665 ntBASIC15.98■□□□□ 0.15
VTNP04004 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.98■□□□□ 0.15
VTNP04004 MIR3677-201ENST00000578964 60 ntBASIC15.98■□□□□ 0.15
VTNP04004 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
VTNP04004 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.98■□□□□ 0.15
VTNP04004 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VTNP04004 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
VTNP04004 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
VTNP04004 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VTNP04004 FAM90A2P-201ENST00000511144 1395 ntBASIC15.98■□□□□ 0.15
VTNP04004 FAM90A25P-201ENST00000528404 1395 ntBASIC15.98■□□□□ 0.15
VTNP04004 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms