Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CHRNA1P02708 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA1P02708 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA1P02708 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA1P02708 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
CHRNA1P02708 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CHRNA1P02708 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA1P02708 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA1P02708 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA1P02708 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA1P02708 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.81■□□□□ 0.12
CHRNA1P02708 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.81■□□□□ 0.12
CHRNA1P02708 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA1P02708 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CHRNA1P02708 CYP51A1P3-201ENST00000400072 1428 ntBASIC15.81■□□□□ 0.12
CHRNA1P02708 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CHRNA1P02708 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA1P02708 AC073869.2-201ENST00000417338 1026 ntBASIC15.81■□□□□ 0.12
CHRNA1P02708 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.81■□□□□ 0.12
CHRNA1P02708 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC15.81■□□□□ 0.12
CHRNA1P02708 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA1P02708 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC15.81■□□□□ 0.12
CHRNA1P02708 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC15.81■□□□□ 0.12
CHRNA1P02708 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC15.81■□□□□ 0.12
CHRNA1P02708 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CHRNA1P02708 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC15.81■□□□□ 0.12
CHRNA1P02708 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC15.81■□□□□ 0.12
CHRNA1P02708 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC15.81■□□□□ 0.12
CHRNA1P02708 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.81■□□□□ 0.12
CHRNA1P02708 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CHRNA1P02708 AC009084.3-201ENST00000623356 437 ntBASIC15.81■□□□□ 0.12
CHRNA1P02708 AC073911.3-201ENST00000624401 631 ntBASIC15.81■□□□□ 0.12
CHRNA1P02708 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.81■□□□□ 0.12
CHRNA1P02708 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC15.81■□□□□ 0.12
CHRNA1P02708 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA1P02708 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA1P02708 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA1P02708 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA1P02708 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CHRNA1P02708 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.81■□□□□ 0.12
CHRNA1P02708 TCAF2P1-201ENST00000291129 2421 ntBASIC15.8■□□□□ 0.12
CHRNA1P02708 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA1P02708 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA1P02708 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA1P02708 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.8■□□□□ 0.12
CHRNA1P02708 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA1P02708 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA1P02708 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.8■□□□□ 0.12
CHRNA1P02708 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA1P02708 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.8■□□□□ 0.12
CHRNA1P02708 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA1P02708 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CHRNA1P02708 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC15.8■□□□□ 0.12
CHRNA1P02708 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CHRNA1P02708 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CHRNA1P02708 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA1P02708 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA1P02708 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA1P02708 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.8■□□□□ 0.12
CHRNA1P02708 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.8■□□□□ 0.12
CHRNA1P02708 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA1P02708 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA1P02708 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.8■□□□□ 0.12
CHRNA1P02708 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA1P02708 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA1P02708 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.8■□□□□ 0.12
CHRNA1P02708 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA1P02708 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA1P02708 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA1P02708 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA1P02708 AC012362.1-201ENST00000434906 739 ntBASIC15.8■□□□□ 0.12
CHRNA1P02708 AC018463.1-201ENST00000456674 917 ntBASIC15.8■□□□□ 0.12
CHRNA1P02708 RN7SL818P-201ENST00000485099 259 ntBASIC15.8■□□□□ 0.12
CHRNA1P02708 ALG1L13P-202ENST00000519320 584 ntBASIC15.8■□□□□ 0.12
CHRNA1P02708 AP000911.2-201ENST00000534330 502 ntBASIC15.8■□□□□ 0.12
CHRNA1P02708 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC15.8■□□□□ 0.12
CHRNA1P02708 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC15.8■□□□□ 0.12
CHRNA1P02708 AC005041.3-201ENST00000606287 649 ntBASIC15.8■□□□□ 0.12
CHRNA1P02708 RN7SL725P-201ENST00000606439 259 ntBASIC15.8■□□□□ 0.12
CHRNA1P02708 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC15.8■□□□□ 0.12
CHRNA1P02708 AC021016.3-201ENST00000608367 477 ntBASIC15.8■□□□□ 0.12
CHRNA1P02708 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
CHRNA1P02708 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.8■□□□□ 0.12
CHRNA1P02708 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA1P02708 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.8■□□□□ 0.12
CHRNA1P02708 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CHRNA1P02708 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA1P02708 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CHRNA1P02708 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.8■□□□□ 0.12
CHRNA1P02708 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CHRNA1P02708 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA1P02708 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CHRNA1P02708 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.8■□□□□ 0.12
CHRNA1P02708 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA1P02708 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CHRNA1P02708 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CHRNA1P02708 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.8■□□□□ 0.12
CHRNA1P02708 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA1P02708 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA1P02708 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms